RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 AKR7A3O95154 331 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 NCF2P19878 526 aaPredicted RBP12.44□□□□□ -0.42
SNX6-210ENST00000557341 TTKP33981 857 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 ACAA2P42765 397 aaKnown RBP12.44□□□□□ -0.42
SNX6-210ENST00000557341 KRTAP1-1Q07627 177 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 C1QTNF12Q5T7M4 302 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 TSPO2Q5TGU0 170 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 KLHL24Q6TFL4 600 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 DNM1P46Q6ZS02 220 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 ABHD12BQ7Z5M8 362 aaPredicted RBP12.44□□□□□ -0.42
SNX6-210ENST00000557341 GPAT4Q86UL3 456 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 PRIMA1Q86XR5 153 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 TMEM99Q8N816 258 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 MAPK1IP1LQ8NDC0 245 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 VPS33AQ96AX1 596 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 ADAD1Q96M93 576 aaKnown RBP12.44□□□□□ -0.42
SNX6-210ENST00000557341 DHRS9Q9BPW9 319 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 TAPBPLQ9BX59 468 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 CACNG6Q9BXT2 260 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 REG4Q9BYZ8 158 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 TMBIM4Q9HC24 238 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 SLC17A5Q9NRA2 495 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 CBLN4Q9NTU7 201 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 ADPRHL2Q9NX46 363 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 GDF2Q9UK05 429 aaPredicted RBP12.44□□□□□ -0.42
SNX6-210ENST00000557341 ZNF232Q9UNY5 417 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 IFT52Q9Y366 437 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 USH1CQ9Y6N9 552 aa12.44□□□□□ -0.42
SNX6-210ENST00000557341 A0A0G2JPF8 293 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 FAM234BA2RU67 622 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 HNRNPCL2B2RXH8 293 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 HNRNPCL3B7ZW38 293 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 E7EQL1 145 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 HNRNPCL1O60812 293 aaKnown RBP12.43□□□□□ -0.42
SNX6-210ENST00000557341 TP53P04637 393 aaPredicted RBP12.43□□□□□ -0.42
SNX6-210ENST00000557341 HNRNPCL4P0DMR1 293 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 MPGP29372 298 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 NUDT6P53370 316 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 STX1BP61266 288 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 BNIP2Q12982 314 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 FADDQ13158 208 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 TMEM225Q6GV28 225 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 C11orf71Q6IPW1 123 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 AAED1Q7RTV5 226 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 SERPINA11Q86U17 422 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 FBXL14Q8N1E6 418 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 MUC15Q8N387 334 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 CLIP4Q8N3C7 705 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 POMGNT2Q8NAT1 580 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 SPATA9Q9BWV2 254 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 RAD21L1Q9H4I0 556 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 PIF1Q9H611 641 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 FKRPQ9H9S5 495 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 B3GALT5Q9Y2C3 310 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 MXRA5Q9NR99 2828 aa12.43□□□□□ -0.42
SNX6-210ENST00000557341 TMEM229AB2RXF0 380 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 POLR3GO15318 223 aaPredicted RBP12.42□□□□□ -0.42
SNX6-210ENST00000557341 SSX4O60224 188 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 VAMP5O95183 116 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 WNT11O96014 354 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 PRG2P13727 222 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 PTNP21246 168 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 FABP6P51161 128 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 SLC25A3Q00325 362 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 RGNQ15493 299 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 ZNF311Q5JNZ3 666 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 C1orf140Q5VVS0 124 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 PRAMEF8Q5VWM4 474 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 PRAMEF7Q5VXH5 474 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 ZNF544Q6NX49 715 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 B3GLCTQ6Y288 498 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 WDR31Q8NA23 367 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 BBS10Q8TAM1 723 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 GTF2H4Q92759 462 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 SLC35B4Q969S0 331 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 C3orf49Q96BT1 292 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 ZNF385AQ96PM9 386 aaKnown RBP12.42□□□□□ -0.42
SNX6-210ENST00000557341 C1QTNF6Q9BXI9 259 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 PAIP1Q9H074 479 aaKnown RBP12.42□□□□□ -0.42
SNX6-210ENST00000557341 A4GALTQ9NPC4 353 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 CHST2Q9Y4C5 530 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 PCDHB14Q9Y5E9 798 aa12.42□□□□□ -0.42
SNX6-210ENST00000557341 C5orf58C9J3I9 102 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 CLIC1O00299 241 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 KRT33AO76009 404 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 AHSA1O95433 338 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 BMP2P12643 396 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 CDH2P19022 906 aaPredicted RBP12.41□□□□□ -0.42
SNX6-210ENST00000557341 GTF2E2P29084 291 aaKnown RBP12.41□□□□□ -0.42
SNX6-210ENST00000557341 MRPL19P49406 292 aaKnown RBP12.41□□□□□ -0.42
SNX6-210ENST00000557341 PRPS1P60891 318 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 IRX1P78414 480 aaPredicted RBP12.41□□□□□ -0.42
SNX6-210ENST00000557341 BEND6Q5SZJ8 279 aaPredicted RBP12.41□□□□□ -0.42
SNX6-210ENST00000557341 SLC2A7Q6PXP3 512 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 EPGNQ6UW88 154 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 ALPK2Q86TB3 2170 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 ZIC4Q8N9L1 334 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 STK35Q8TDR2 534 aa12.41□□□□□ -0.42
SNX6-210ENST00000557341 C7orf26Q96N11 449 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms