RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NLGN4YQ8NFZ3 816 aaPredicted RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 OR9I1Q8NGQ6 314 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 METTL9Q9H1A3 318 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 GNG12Q9UBI6 72 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 SDK2Q58EX2 2172 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CACNG3O60359 315 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF44P15621 663 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CD1EP15812 388 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 EMP2P54851 167 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 BPIFB2Q8N4F0 458 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 BET1LQ9NYM9 111 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 MOKQ9UQ07 419 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 UMAD1C9J7I0 102 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 AHSGP02765 367 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 HNF1AP20823 631 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CYS1Q717R9 158 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 FBXW5Q969U6 566 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 ELF4Q99607 663 aaPredicted RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 NSUN3Q9H649 340 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 IL17RBQ9NRM6 502 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 NUPL2O15504 423 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 FOXN2P32314 431 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 TNFSF9P41273 254 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 KREMEN1Q96MU8 473 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 ARL2-SNX15V9GYD0 113 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 SLC16A7O60669 478 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 LILRB3O75022 631 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 GABRR1P24046 479 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CSNK1A1P48729 337 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 PAFAH1B3Q15102 231 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 C1QTNF2Q9BXJ5 285 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 HRH3Q9Y5N1 445 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 NKX6-3A6NJ46 265 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 NFATC2Q13469 925 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 AGBL4Q5VU57 503 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 PODNL1Q6PEZ8 512 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CXorf58Q96LI9 332 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 DPH7Q9BTV6 452 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 DOCK8Q8NF50 2099 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 C8AP07357 584 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CSKP41240 450 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CTXN1P60606 82 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 POU4F3Q15319 338 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 GTDC1Q4AE62 458 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 WBP2NLQ6ICG8 309 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 OR4K5Q8NGD3 323 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 KLHDC7BQ96G42 594 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 RBM24Q9BX46 236 aaKnown RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 KCNK15Q9H427 330 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 EGLN3Q9H6Z9 239 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 HRASLS2Q9NWW9 162 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 A8MUA0 341 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 LOC730098B7Z3J9 87 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 SCGB1A1P11684 91 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CRISP2P16562 243 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 CRHBPP24387 322 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 DCAF7P61962 342 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 UBE3DQ7Z6J8 389 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 MISPQ8IVT2 679 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 RIMS4Q9H426 269 aaPredicted RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 SYNPO2LQ9H987 977 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 VSX1Q9NZR4 365 aaPredicted RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 OPCMLQ14982 345 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF718Q3SXZ3 478 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 PRR18Q8N4B5 295 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 OR6K3Q8NGY3 331 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 DIO2Q92813 273 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 BARX1Q9HBU1 254 aaPredicted RBP8.28□□□□□ -1.08
SYNE3-205ENST00000557275 RNF11Q9Y3C5 154 aa8.28□□□□□ -1.08
SYNE3-205ENST00000557275 C10orf71Q711Q0 1435 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 OTOP2Q7RTS6 562 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 SFT2D1Q8WV19 159 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 FBXO34Q9NWN3 711 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 CLCF1Q9UBD9 225 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 FER1L5A0AVI2 2057 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 DBX1A6NMT0 343 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 ICMTO60725 284 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 SORBS2O94875 1100 aaKnown RBP8.27□□□□□ -1.08
SYNE3-205ENST00000557275 TPOP07202 933 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 GSTP1P09211 210 aaKnown RBP8.27□□□□□ -1.08
SYNE3-205ENST00000557275 TIMP2P16035 220 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 G6PCP35575 357 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 RABGGTBP53611 331 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 ZNF805Q5CZA5 627 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 OR52B6Q8NGF0 335 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 C12orf57Q99622 126 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 DPH1Q9BZG8 443 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 RNF19AQ9NV58 838 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 SRPK3Q9UPE1 567 aa8.27□□□□□ -1.08
SYNE3-205ENST00000557275 MN1Q10571 1320 aaPredicted RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 A6NJY4 79 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CBX7O95931 251 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CSF2RAP15509 400 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CLCNKBP51801 687 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 WDR4P57081 412 aaKnown RBP8.27□□□□□ -1.09
SYNE3-205ENST00000557275 CSNK1G2P78368 415 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 GPLD1P80108 840 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 TPBGQ13641 420 aa8.27□□□□□ -1.09
SYNE3-205ENST00000557275 PLEKHA2Q9HB19 425 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms