RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 AQP7P3A6NL99 342 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 PPP3CBP16298 524 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 SLC7A2P52569 658 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 SLC17A1Q14916 467 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 ZNF613Q6PF04 617 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 OR4D11Q8NGI4 311 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 MED18Q9BUE0 208 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 OR10A4Q9H209 315 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 GPR52Q9Y2T5 361 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 NOSIPQ9Y314 301 aaKnown RBP20.27■□□□□ 0.84
TDP1-216ENST00000556867 CSMD1Q96PZ7 3565 aa20.27■□□□□ 0.84
TDP1-216ENST00000556867 HRNRQ86YZ3 2850 aaPredicted RBP20.27■□□□□ 0.83
TDP1-216ENST00000556867 AKAP6Q13023 2319 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 A0A087WUJ7 227 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 FTCDNL1E5RQL4 147 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 NME4O00746 187 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 AKR7A3O95154 331 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 CNOT4O95628 575 aaKnown RBP20.26■□□□□ 0.83
TDP1-216ENST00000556867 IFNA14P01570 189 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 EDNRAP25101 427 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 Q6ZT83 130 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 TMEM99Q8N816 258 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 VANGL1Q8TAA9 524 aaPredicted RBP20.26■□□□□ 0.83
TDP1-216ENST00000556867 PROX1Q92786 737 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 KTI12Q96EK9 354 aaPredicted RBP20.26■□□□□ 0.83
TDP1-216ENST00000556867 SF3B5Q9BWJ5 86 aaKnown RBP20.26■□□□□ 0.83
TDP1-216ENST00000556867 POLDIP3Q9BY77 421 aaKnown RBP20.26■□□□□ 0.83
TDP1-216ENST00000556867 PCDHAC1Q9H158 963 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 CLEC4MQ9H2X3 399 aaPredicted RBP20.26■□□□□ 0.83
TDP1-216ENST00000556867 ADPRHL2Q9NX46 363 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 ZNF226Q9NYT6 803 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 BAG5Q9UL15 447 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 SLC9A8Q9Y2E8 581 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 FLVCR1Q9Y5Y0 555 aa20.26■□□□□ 0.83
TDP1-216ENST00000556867 CSMD2Q7Z408 3487 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 NDUFAB1O14561 156 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 CASKO14936 926 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 KDELR2P33947 212 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 RPS5P46782 204 aaKnown RBP20.25■□□□□ 0.83
TDP1-216ENST00000556867 P2RY4P51582 365 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 CDH12P55289 794 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 LIPEQ05469 1076 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 P2RY6Q15077 328 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 CXorf67Q86X51 503 aaPredicted RBP20.25■□□□□ 0.83
TDP1-216ENST00000556867 RBM45Q8IUH3 476 aaKnown RBP20.25■□□□□ 0.83
TDP1-216ENST00000556867 ZNF100Q8IYN0 542 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 HDHD5Q9BXW7 423 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 FAM53CQ9NYF3 392 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 PRSS50Q9UI38 385 aa20.25■□□□□ 0.83
TDP1-216ENST00000556867 TRAV36DV7A0A075B6V5 113 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 OR2T1O43869 369 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 DCTN3O75935 186 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 NTF4P34130 210 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 LRRC23Q53EV4 343 aaPredicted RBP20.24■□□□□ 0.83
TDP1-216ENST00000556867 ENTPD8Q5MY95 495 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 FAM69AQ5T7M9 428 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 ANKRD34AQ69YU3 496 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 STEAP2Q8NFT2 490 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 OR9K2Q8NGE7 335 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 RNF217Q8TC41 542 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 APH1AQ96BI3 265 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 LRRC37BQ96QE4 947 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 TMEM43Q9BTV4 400 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 ACTR6Q9GZN1 396 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 ALG2Q9H553 416 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 GMPR2Q9P2T1 348 aaKnown RBP20.24■□□□□ 0.83
TDP1-216ENST00000556867 ABCD2Q9UBJ2 740 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 PRR14LQ5THK1 2151 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 CCDC168Q8NDH2 2452 aa20.24■□□□□ 0.83
TDP1-216ENST00000556867 CPSF4LA6NMK7 179 aaKnown RBP20.23■□□□□ 0.83
TDP1-216ENST00000556867 CHP2O43745 196 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 VAMP5O95183 116 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 ADAP00813 363 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 HRGP04196 525 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 CRYGSP22914 178 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 ITGADQ13349 1161 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 CYBRD1Q53TN4 286 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 SFRP5Q5T4F7 317 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 C22orf34Q6ZV56 151 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.23■□□□□ 0.83
TDP1-216ENST00000556867 CARM1Q86X55 608 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 ANKS4BQ8N8V4 417 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 OR6S1Q8NH40 331 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 ADAMTS16Q8TE57 1224 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 TAAR8Q969N4 342 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 TMEM45BQ96B21 275 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 SLC25A36Q96CQ1 311 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 CCT8L2Q96SF2 557 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 EPYCQ99645 322 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 RASD1Q9Y272 281 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 SH3GLB1Q9Y371 365 aa20.23■□□□□ 0.83
TDP1-216ENST00000556867 TRAPPC13A5PLN9 417 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 MRPL33O75394 65 aaKnown RBP20.22■□□□□ 0.83
TDP1-216ENST00000556867 LYPD3O95274 346 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 COX5AP20674 150 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 GTF2E2P29084 291 aaKnown RBP20.22■□□□□ 0.83
TDP1-216ENST00000556867 GSK3BP49841 420 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 PSME3P61289 254 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 FBXW9Q5XUX1 488 aa20.22■□□□□ 0.83
TDP1-216ENST00000556867 TMEM225Q6GV28 225 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms