RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR3A2P47893 321 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 AQP5P55064 265 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 TGFBR3Q03167 851 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 FUT5Q11128 374 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF311Q5JNZ3 666 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 PRAMEF8Q5VWM4 474 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 PRAMEF7Q5VXH5 474 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 TMEM225Q6GV28 225 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 WBP2NLQ6ICG8 309 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF704Q6ZNC4 412 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-222ENST00000556768 BHLHA15Q7RTS1 189 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-222ENST00000556768 ADGRG3Q86Y34 549 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 LRRC75A-AS1Q8N1F1 130 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 CADM2Q8N3J6 435 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF417Q8TAU3 575 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 UBASH3BQ8TF42 649 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 TMEM171Q8WVE6 324 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 GTF2H4Q92759 462 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF587Q96SQ5 575 aaPredicted RBP6.5□□□□□ -1.37
SCFD1-222ENST00000556768 CCDC28BQ9BUN5 200 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 SPATA5L1Q9BVQ7 753 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 TAPBPLQ9BX59 468 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 VIPAS39Q9H9C1 493 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 RLIMQ9NVW2 624 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 ASB6Q9NWX5 421 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 CCDC167Q9P0B6 97 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 UPB1Q9UBR1 384 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 RPS6KB2Q9UBS0 482 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 SLC13A4Q9UKG4 626 aa6.5□□□□□ -1.37
SCFD1-222ENST00000556768 MPDZO75970 2070 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 A0A096LPI6 279 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 CDHR4A6H8M9 788 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 CLOCKO15516 846 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 TMCC2O75069 709 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 GCM2O75603 506 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-222ENST00000556768 SERPINB7O75635 380 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 KRT33AO76009 404 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 CD3EP07766 207 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 EPS8Q12929 822 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 RGNQ15493 299 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 TIMM23BQ5SRD1 257 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 RNF220Q5VTB9 566 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 FBXW9Q5XUX1 488 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 OR7E24Q6IFN5 339 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 OR9I1Q8NGQ6 314 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 SPDL1Q96EA4 605 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 AURKBQ96GD4 344 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-222ENST00000556768 RADILQ96JH8 1075 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 ARL5BQ96KC2 179 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 POTEKPQ9BYX7 375 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 OR11A1Q9GZK7 315 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 GSX1Q9H4S2 264 aaPredicted RBP6.49□□□□□ -1.37
SCFD1-222ENST00000556768 TCF7L1Q9HCS4 588 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 SLCO1B3Q9NPD5 702 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 MRGBPQ9NV56 204 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 FAIMQ9NVQ4 179 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 SELENONQ9NZV5 590 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 OSGIN1Q9UJX0 560 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 RNF115Q9Y4L5 304 aa6.49□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF469Q96JG9 3925 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 IGKV3D-15A0A087WSY6 115 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PRORSD1PA6NEY8 169 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 A8MVM7 634 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 NR5A2O00482 541 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 DEAF1O75398 565 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 LYZL6O75951 148 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 VAMP5O95183 116 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 THBDP07204 575 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 VIMP08670 466 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 GKN3PP0CG01 181 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 RPS4Y1P22090 263 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SLC6A2P23975 617 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 GTF2E2P29084 291 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 IDUAP35475 653 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 NCALDP61601 193 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 FOXD4Q12950 439 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PPA1Q15181 289 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 TAB1Q15750 504 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 AGKQ53H12 422 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SLC2A7Q6PXP3 512 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PAQR6Q6TCH4 344 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 KLHL17Q6TDP4 642 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 PRSS57Q6UWY2 283 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 C22orf34Q6ZV56 151 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 MAVSQ7Z434 540 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ABHD12BQ7Z5M8 362 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 GPAT4Q86UL3 456 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 VRK2Q86Y07 508 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 CCDC103Q8IW40 242 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 BHLHE22Q8NFJ8 381 aaPredicted RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 BBS10Q8TAM1 723 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SLC35B4Q969S0 331 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF524Q96C55 264 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 TRMT61AQ96FX7 289 aaKnown RBP6.48□□□□□ -1.37
SCFD1-222ENST00000556768 TMEM19Q96HH6 336 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 C18orf12Q96KH6 178 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 MAGEB18Q96M61 343 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 ZNF607Q96SK3 696 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 SIKE1Q9BRV8 207 aa6.48□□□□□ -1.37
SCFD1-222ENST00000556768 BDH2Q9BUT1 245 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms