RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 TPSB2P20231 275 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 DNAJB1P25685 340 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 NPY1RP25929 384 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 CALCRP30988 508 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 PLA2G16P53816 162 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 MXD4Q14582 209 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-216ENST00000555550 TPSAB1Q15661 275 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 SAMD4BQ5PRF9 694 aaKnown RBP1.96□□□□□ -2.1
SCFD1-216ENST00000555550 GPRC6AQ5T6X5 926 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 SLC26A11Q86WA9 606 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 Q8N976 141 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 OR10G9Q8NGN4 311 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 SYNPRQ8TBG9 265 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 HTR3CQ8WXA8 447 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 BMFQ96LC9 184 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 FAM111AQ96PZ2 611 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 ZNF430Q9H8G1 570 aaPredicted RBP1.96□□□□□ -2.1
SCFD1-216ENST00000555550 GNG12Q9UBI6 72 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 OR12D3Q9UGF7 316 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 OPN4Q9UHM6 478 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 STAP1Q9ULZ2 295 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 GSTK1Q9Y2Q3 226 aa1.96□□□□□ -2.1
SCFD1-216ENST00000555550 NCAPD2Q15021 1401 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 CXCL13O43927 109 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 UGT1A9O60656 530 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 BAG2O95816 211 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 MT-ND3P03897 115 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 ARF4P18085 180 aaPredicted RBP1.95□□□□□ -2.1
SCFD1-216ENST00000555550 ATP6V1E1P36543 226 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 RABIFP47224 123 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 GMFBP60983 142 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 ENPEPQ07075 957 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 SNTB2Q13425 540 aaKnown RBP1.95□□□□□ -2.1
SCFD1-216ENST00000555550 PARP15Q460N3 678 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 CHRFAM7AQ494W8 412 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 BCL7AQ4VC05 210 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 TMEM255AQ5JRV8 349 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 Q5W150 140 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 RAB12Q6IQ22 244 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 CBLN3Q6UW01 205 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 C19orf35Q6ZS72 473 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 STXBP6Q8NFX7 210 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 OR4F15Q8NGB8 312 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 OR4K14Q8NGD5 310 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 PAGE5Q96GU1 130 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 ZNF670Q9BS34 389 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 ALG12Q9BV10 488 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 WDR76Q9H967 626 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 SIRT7Q9NRC8 400 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 COPS3Q9UNS2 423 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 DOCK9Q9BZ29 2069 aa1.95□□□□□ -2.1
SCFD1-216ENST00000555550 PHF3Q92576 2039 aaKnown RBP1.95□□□□□ -2.1
SCFD1-216ENST00000555550 CTAGE5O15320 804 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 CD5LO43866 347 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 ENTPD5O75356 428 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 SCGB2A1O75556 95 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 ADCY5O95622 1261 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 PTBP3O95758 552 aaKnown RBP1.94□□□□□ -2.1
SCFD1-216ENST00000555550 PTGDSP41222 190 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 GPM6AP51674 278 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 PKNOX1P55347 436 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 KIAA0087Q14695 138 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 GNMTQ14749 295 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 RSPO1Q2MKA7 263 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-216ENST00000555550 MARCH8Q5T0T0 291 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 MRPL43Q8N983 215 aaKnown RBP1.94□□□□□ -2.1
SCFD1-216ENST00000555550 OR4D9Q8NGE8 314 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 TMEM237Q96Q45 408 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 KCNK16Q96T55 309 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 ZFP14Q9HCL3 533 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 QPCTLQ9NXS2 382 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
SCFD1-216ENST00000555550 NSG1A0A0A6YYJ2 146 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 RBMY1BA6NDE4 496 aaKnown RBP1.93□□□□□ -2.1
SCFD1-216ENST00000555550 RBMY1EA6NEQ0 496 aaKnown RBP1.93□□□□□ -2.1
SCFD1-216ENST00000555550 IGKV4-1P06312 121 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 CISD3P0C7P0 127 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 RBMY1DP0C7P1 496 aaKnown RBP1.93□□□□□ -2.1
SCFD1-216ENST00000555550 RBMY1A1P0DJD3 496 aaKnown RBP1.93□□□□□ -2.1
SCFD1-216ENST00000555550 MUC1P15941 1255 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-216ENST00000555550 CNR1P21554 472 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 GDI1P31150 447 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 STARD6P59095 220 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 CYTH1Q15438 398 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 MICBQ29980 383 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 HDDC3Q8N4P3 179 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 CLDN19Q8N6F1 224 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 ZFP90Q8TF47 636 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 SMARCD2Q92925 531 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 RMI2Q96E14 147 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 CMTM7Q96FZ5 175 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 ACTR6Q9GZN1 396 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 SRMSQ9H3Y6 488 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 RNF167Q9H6Y7 350 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 NINJ2Q9NZG7 142 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 KCNIP1Q9NZI2 227 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 AK6Q9Y3D8 172 aaKnown RBP1.93□□□□□ -2.1
SCFD1-216ENST00000555550 PIKFYVEQ9Y2I7 2098 aa1.93□□□□□ -2.1
SCFD1-216ENST00000555550 TRAV40A0A0B4J280 105 aa1.92□□□□□ -2.1
SCFD1-216ENST00000555550 A0A1W2PNV4 684 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms