RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 GSAPA4D1B5 854 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 SLC9B1P1A6NJY1 282 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 VPS26AO75436 327 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 SCGB2A1O75556 95 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 ADCY5O95622 1261 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 CA1P00915 261 aaPredicted RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 OPN1MWP04001 364 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 LINC00869P0C866 280 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 OPN1MW2P0DN77 364 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 OPN1MW3P0DN78 364 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 POLR2EP19388 210 aaKnown RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 CYP2B6P20813 491 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 CYP2F1P24903 491 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 ANXA13P27216 316 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 VDAC2P45880 294 aaPredicted RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 ASMTP46597 345 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 UBE2AP49459 152 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 GMFBP60983 142 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 RAB40BQ12829 278 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 PDIA5Q14554 519 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 RFX4Q33E94 735 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 MARCH8Q5T0T0 291 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 GPRC6AQ5T6X5 926 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 C1orf94Q6P1W5 598 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 PLBD1Q6P4A8 553 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 CCDC137Q6PK04 289 aaKnown RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 LYPD2Q6UXB3 125 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 APTXQ7Z2E3 356 aaKnown RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 DPY19L4Q7Z388 723 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 ZNF571Q7Z3V5 609 aaPredicted RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 LHFPL4Q7Z7J7 247 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 PAQR7Q86WK9 346 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 MISPQ8IVT2 679 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 RDH10Q8IZV5 341 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 KDM8Q8N371 416 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 FTMTQ8N4E7 242 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 RNF148Q8N7C7 305 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 OR52B4Q8NGK2 314 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 MCOLN3Q8TDD5 553 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 SAMD8Q96LT4 415 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 TESK2Q96S53 571 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 KRT23Q9C075 422 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 ATG10Q9H0Y0 220 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 NXF5Q9H1B4 397 aaKnown RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 RWDD1Q9H446 243 aaPredicted RBP0.97□□□□□ -2.25
SRP54-207ENST00000555535 ZNF385DQ9H6B1 395 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 VAT1LQ9HCJ6 419 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 HOXC10Q9NYD6 342 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 NINJ2Q9NZG7 142 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 OR12D3Q9UGF7 316 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 IL19Q9UHD0 177 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 ANAPC7Q9UJX3 599 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 FOXJ3Q9UPW0 622 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 CHMP2BQ9UQN3 213 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 ALG6Q9Y672 507 aa0.97□□□□□ -2.25
SRP54-207ENST00000555535 CLSPNQ9HAW4 1339 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 A0A0U1RQV5 110 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 PCNX2A6NKB5 2137 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 VGLL3A8MV65 326 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 C16orf90A8MZG2 172 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 AGPAT2O15120 278 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 MBTPS2O43462 519 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 PRKYO43930 277 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 SSX5O60225 188 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 TM7SF2O76062 418 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 SRP72O76094 671 aaKnown RBP0.96□□□□□ -2.26
SRP54-207ENST00000555535 OR4F21O95013 312 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 POLR2MP0CAP2 368 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 GAP43P17677 238 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 PSMC3P17980 439 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 DPP4P27487 766 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 FMO3P31513 532 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 KIR2DS4P43632 304 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 PRKXP51817 358 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 HSPA2P54652 639 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 NAPAP54920 295 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 EWSR1Q01844 656 aaKnown RBP eCLIP0.96□□□□□ -2.26
SRP54-207ENST00000555535 TRIM16LQ309B1 348 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 C12orf60Q5U649 245 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 BLOC1S2Q6QNY1 142 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 ACOT1Q86TX2 421 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 TMEM17Q86X19 198 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 C15orf54Q8N8G6 183 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 MINDY2Q8NBR6 621 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 FAM71CQ8NEG0 241 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 DENND6BQ8NEG7 585 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 OR4F15Q8NGB8 312 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 OR5L2Q8NGL0 311 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 OR10G9Q8NGN4 311 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 PNPT1Q8TCS8 783 aaKnown RBP0.96□□□□□ -2.26
SRP54-207ENST00000555535 RGP1Q92546 391 aaPredicted RBP0.96□□□□□ -2.26
SRP54-207ENST00000555535 RPL3LQ92901 407 aaKnown RBP0.96□□□□□ -2.26
SRP54-207ENST00000555535 TMEM186Q96B77 213 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 MRPL38Q96DV4 380 aaKnown RBP0.96□□□□□ -2.26
SRP54-207ENST00000555535 AKR1E2Q96JD6 320 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 FAM111AQ96PZ2 611 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 VPS35Q96QK1 796 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 P2RY13Q9BPV8 354 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 DUSP16Q9BY84 665 aa0.96□□□□□ -2.26
SRP54-207ENST00000555535 NAT10Q9H0A0 1025 aaKnown RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms