RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 P3H2Q8IVL5 708 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 SLC43A2Q8N370 569 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 RPRMLQ8N4K4 120 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 MARVELD2Q8N4S9 558 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 FNDC9Q8TBE3 224 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 ZFP3Q96NJ6 502 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 ALPK1Q96QP1 1244 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 TM9SF2Q99805 663 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 TAPBPLQ9BX59 468 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 GP6Q9HCN6 339 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 FANCFQ9NPI8 374 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 C20orf141Q9NUB4 165 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 DNAJB9Q9UBS3 223 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 B3GALT5Q9Y2C3 310 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 TESMINQ9Y4I5 508 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 CORINQ9Y5Q5 1042 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 LYVE1Q9Y5Y7 322 aa11.34□□□□□ -0.59
SYNE2-219ENST00000555323 NBASA2RRP1 2371 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 LOC102725191A0A1B0GVB3 256 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 AQP7P3A6NL99 342 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 TNFRSF11BO00300 401 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 CCL21O00585 134 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 SMAD9O15198 467 aaKnown RBP11.33□□□□□ -0.6
SYNE2-219ENST00000555323 CLOCKO15516 846 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 RRP9O43818 475 aaKnown RBP11.33□□□□□ -0.6
SYNE2-219ENST00000555323 CYTIPO60759 359 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 AQP8O94778 261 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 SYNGR4O95473 234 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 TSPAN19P0C672 248 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 ASAH2BP0C7U1 165 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 FCGR2AP12318 317 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 SPIBQ01892 262 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 SEC23BQ15437 767 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 GUSBP1Q15486 140 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 RIPPLY2Q5TAB7 128 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 TBPL2Q6SJ96 375 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 C3P1Q6ZMU1 363 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF730Q6ZMV8 503 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 FCRLAQ7L513 359 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 RRM2BQ7LG56 351 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 NRMQ8IXM6 262 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 LINC00471Q8N535 108 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 SCAIQ8N9R8 606 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 C9orf106Q8NAJ2 232 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 ADPRHL1Q8NDY3 354 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 OR52J3Q8NH60 311 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 PFN4Q8NHR9 129 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 RNF128Q8TEB7 428 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 ROBO4Q8WZ75 1007 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 ZHX1-C8orf76Q96EF9 292 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 MOGAT1Q96PD6 335 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 NAA11Q9BSU3 229 aaPredicted RBP11.33□□□□□ -0.6
SYNE2-219ENST00000555323 REEP1Q9H902 201 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 FKRPQ9H9S5 495 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 NTN4Q9HB63 628 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 GLRX2Q9NS18 164 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 MRPL39Q9NYK5 338 aaKnown RBP11.33□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF229Q9UJW7 825 aa11.33□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF462Q96JM2 2506 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ENO4A6NNW6 628 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF814B7Z6K7 855 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ANKRD65E5RJM6 399 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 H3BNX3 289 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 J3QKU1 62 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 LRRTM2O43300 516 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ENTPD5O75356 428 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 DEAF1O75398 565 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 TIPRLO75663 272 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 AKR7A3O95154 331 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 VAMP5O95183 116 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 CH25HO95992 272 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 IL2RAP01589 272 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 CRHP06850 196 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 FCGR1AP12314 374 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 FUT1P19526 365 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 FASP25445 335 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 GRPRP30550 384 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 OMPP47874 163 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SLC16A1P53985 500 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 NUP107P57740 925 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 PMPCAQ10713 525 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ZP4Q12836 540 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 RNPS1Q15287 305 aaKnown RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 POU4F3Q15319 338 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ATP6AP1Q15904 470 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ANKDD1AQ495B1 522 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 FGD3Q5JSP0 725 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 EEF1A1P5Q5VTE0 462 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ZNF770Q6IQ21 691 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 C1orf94Q6P1W5 598 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 MTFR2Q6P444 385 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 PLXDC2Q6UX71 529 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 H1FNTQ75WM6 255 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 MAMDC2Q7Z304 686 aaPredicted RBP11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SLC46A3Q7Z3Q1 461 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 ZER1Q7Z7L7 766 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 TMEM99Q8N816 258 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 OR4K5Q8NGD3 323 aa11.32□□□□□ -0.6
SYNE2-219ENST00000555323 SLC25A36Q96CQ1 311 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms