RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 KCNE1BA0A087WTH5 132 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 TRBV7-9A0A0J9YWB2 115 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 KBTBD11-OT1A0A1B0GTJ5 212 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 MEX3AA1L020 520 aaKnown RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 CCDC182A6NF36 153 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 RAB29O14966 203 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 SIVA1O15304 175 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 TYROBPO43914 113 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 AIREO43918 545 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 RAMP1O60894 148 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 MYL2P10916 166 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 CCL2P13500 99 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 CD1DP15813 335 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 ZNF3P17036 446 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 BCKDHBP21953 392 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 FCGR2CP31995 323 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 OPRD1P41143 372 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 XCR1P46094 333 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 ARRB1P49407 418 aaPredicted RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 CRYBA2P53672 197 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 IST1P53990 364 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 TMEM50BP56557 158 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 RIPK4P57078 832 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 TNNC1P63316 161 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 TPM4P67936 248 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 RAD51Q06609 339 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 ZNF33BQ06732 778 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 ZNF177Q13360 481 aaPredicted RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 MLF2Q15773 248 aaPredicted RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 ECSCRQ19T08 205 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 DCST2Q5T1A1 773 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 SEL1L2Q5TEA6 688 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 C9orf135Q5VTT2 229 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 CCDC137Q6PK04 289 aaKnown RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 C6orf89Q6UWU4 347 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 Q6ZSR3 168 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 STOX1Q6ZVD7 989 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 NDUFAF7Q7L592 441 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 ASCL5Q7RTU5 278 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 SLC16A14Q7RTX9 510 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 SLC47A2Q86VL8 602 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 CMTM8Q8IZV2 173 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 LSMEM2Q8N112 164 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 OR5AP2Q8NGF4 316 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 OR13C9Q8NGT0 318 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 OR6S1Q8NH40 331 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 MAPK15Q8TD08 544 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 CCDC12Q8WUD4 166 aaPredicted RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 CACNG8Q8WXS5 425 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 RCHY1Q96PM5 261 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 ZNF670Q9BS34 389 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 OR51M1Q9H341 326 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 NHEJ1Q9H9Q4 299 aaPredicted RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 WDR41Q9HAD4 459 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 MRPL47Q9HD33 250 aaKnown RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 CLN8Q9UBY8 286 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 CD300AQ9UGN4 299 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 LNPEPQ9UIQ6 1025 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 STAP1Q9ULZ2 295 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 BARX2Q9UMQ3 279 aaPredicted RBP4.25□□□□□ -1.73
VRK1-203ENST00000555067 USP47Q96K76 1375 aa4.25□□□□□ -1.73
VRK1-203ENST00000555067 TCRBV9S1A1TA0A576 114 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 RNF212BA8MTL3 300 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 CHST1O43916 411 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 HCN1O60741 890 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 HUS1O60921 280 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 WNT2P09544 360 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 OR9G9P0C7N8 305 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 EIF2S2P20042 333 aaKnown RBP4.24□□□□□ -1.73
VRK1-203ENST00000555067 PAX9P55771 341 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 CLDN18P56856 261 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 RPS14P62263 151 aaKnown RBP4.24□□□□□ -1.73
VRK1-203ENST00000555067 DHODHQ02127 395 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 ANGPT1Q15389 498 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 DUSP7Q16829 419 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 TRIM16LQ309B1 348 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 HSDL1Q3SXM5 330 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 SOHLH1Q5JUK2 328 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 REEP3Q6NUK4 255 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 H3F3CQ6NXT2 135 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 LRRC74BQ6ZQY2 392 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 IFNEQ86WN2 208 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 HOGA1Q86XE5 327 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 TPRX1Q8N7U7 411 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 C8orf31Q8N9H6 132 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 LRRC75AQ8NAA5 344 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 FBXO36Q8NEA4 188 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 OR52E5Q8NH55 327 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 GPR151Q8TDV0 419 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 RNF2Q99496 336 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 ATP5SQ99766 215 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 SLC35A5Q9BS91 424 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 HINT2Q9BX68 163 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 TM6SF2Q9BZW4 377 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 ADAP2Q9NPF8 381 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 NUDT4Q9NZJ9 180 aa4.24□□□□□ -1.73
VRK1-203ENST00000555067 MYEF2Q9P2K5 600 aaKnown RBP4.24□□□□□ -1.73
VRK1-203ENST00000555067 WRAP73Q9P2S5 460 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms