RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 SF3B5Q9BWJ5 86 aaKnown RBP9.47□□□□□ -0.89
TMEM260-206ENST00000555046 SLC19A3Q9BZV2 496 aa9.47□□□□□ -0.89
TMEM260-206ENST00000555046 PLSCR4Q9NRQ2 329 aa9.47□□□□□ -0.89
TMEM260-206ENST00000555046 DCAF13Q9NV06 445 aaKnown RBP9.47□□□□□ -0.89
TMEM260-206ENST00000555046 ELOVL5Q9NYP7 299 aa9.47□□□□□ -0.89
TMEM260-206ENST00000555046 PROCRQ9UNN8 238 aa9.47□□□□□ -0.89
TMEM260-206ENST00000555046 TRAV36DV7A0A075B6V5 113 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 LIPT2A6NK58 231 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 FAM90A27PA6NNH2 459 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 M0R3H8 397 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 CHP2O43745 196 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 SS18L1O75177 396 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 NPIPB7O75200 414 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 AQP8O94778 261 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 OR5F1O95221 314 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 MT-ATP6P00846 226 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 SERPINA1P01009 418 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 HIST1H2ABP04908 130 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 T-ENOLP0DO92 83 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 CD8BP10966 210 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 HOXB6P17509 224 aaKnown RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 TCN1P20061 433 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 FPR1P21462 350 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 HTR2AP28223 471 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 SHC1P29353 583 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 CPOXP36551 454 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 RBM34P42696 430 aaKnown RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 KIR2DL2P43627 348 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 ASCL1P50553 236 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 SMIM11AP58511 58 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 H3F3AP84243 136 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 CEACAM7Q14002 265 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 TESK1Q15569 626 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 FBXL19-AS1Q494R0 122 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 MTX3Q5HYI7 312 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 FAM69AQ5T7M9 428 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 BEND4Q6ZU67 534 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 NCCRP1Q6ZVX7 275 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 HIST3H2AQ7L7L0 130 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 GALNT5Q7Z7M9 940 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 GCNT2Q8N0V5 402 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 NAXEQ8NCW5 288 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 ADAMTS16Q8TE57 1224 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 HIST1H2ACQ93077 130 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 RNASE6Q93091 150 aaKnown RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 STARD4Q96DR4 205 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 SPOCK3Q9BQ16 436 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 USB1Q9BQ65 265 aaKnown RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 HDHD5Q9BXW7 423 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 SRXN1Q9BYN0 137 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 UCK2Q9BZX2 261 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 KLHL4Q9C0H6 718 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 OR11A1Q9GZK7 315 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 COQ10BQ9H8M1 238 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 C6orf203Q9P0P8 240 aaPredicted RBP9.46□□□□□ -0.9
TMEM260-206ENST00000555046 KLHL13Q9P2N7 655 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 EGFL7Q9UHF1 273 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 USP22Q9UPT9 525 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 B3GALT5Q9Y2C3 310 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 CORINQ9Y5Q5 1042 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 SNX13Q9Y5W8 968 aa9.46□□□□□ -0.9
TMEM260-206ENST00000555046 EXPH5Q8NEV8 1989 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 CPSF4LA6NMK7 179 aaKnown RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 A8MXE2 369 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 TMEM229AB2RXF0 380 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 EEF1E1-BLOC1S5C9J1V9 151 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 EEF1E1O43324 174 aaKnown RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 TNFSF13O75888 250 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 SMNDC1O75940 238 aaKnown RBP eCLIP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 CNOT4O95628 575 aaKnown RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 CRYBA2P53672 197 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 CDH12P55289 794 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 FOXF2Q12947 444 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 TRIM25Q14258 630 aaKnown RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 OR7A5Q15622 319 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 FXNQ16595 210 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 LINC00114Q6XXX2 140 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 DEF8Q6ZN54 512 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 H1FNTQ75WM6 255 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 RRM2BQ7LG56 351 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 LIX1LQ8IVB5 337 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 TUSC5Q8IXB3 177 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 C10orf53Q8N6V4 93 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 RNF148Q8N7C7 305 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 SLC41A3Q96GZ6 507 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 PYURFQ96I23 114 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 LRGUKQ96M69 825 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 BTBD10Q9BSF8 475 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 FNDC11Q9BVV2 318 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 RBM24Q9BX46 236 aaKnown RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 ASPNQ9BXN1 380 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 RSPO3Q9BXY4 272 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 MMADHCQ9H3L0 296 aaPredicted RBP9.45□□□□□ -0.9
TMEM260-206ENST00000555046 BCO1Q9HAY6 547 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 TAS2R1Q9NYW7 299 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 JKAMPQ9P055 326 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 ACTR3BQ9P1U1 418 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 NDRG3Q9UGV2 375 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 RIMS3Q9UJD0 308 aa9.45□□□□□ -0.9
TMEM260-206ENST00000555046 ITGB1BP2Q9UKP3 347 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms