RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 MIXL1Q9H2W2 232 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 LYRM4Q9HD34 91 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CPNE7Q9UBL6 633 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SIGLEC7Q9Y286 467 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 NEUROG3Q9Y4Z2 214 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 V9GYH0 126 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 FREM3P0C091 2139 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 A0A0A6YYC8 382 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 A0A0A6YYD5 115 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 PRSS38A1L453 326 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 TVP23AA6NH52 213 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 RHPN2P1A8MT19 583 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 A8MUA0 341 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 I3L1I5 382 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 MAS1P04201 325 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SPARCP09486 303 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CSF1P09603 554 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 EPXP11678 715 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SSTR2P30874 369 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 ADH7P40394 386 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 FNTBP49356 437 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CLDN2P57739 230 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CXADRP78310 365 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CYCSP99999 105 aaKnown RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 ARL6IP1Q15041 203 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 KLHL26Q53HC5 615 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 ZBTB37Q5TC79 503 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 DPY19L2P2Q6ZN68 376 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 ETFBKMTQ8IXQ9 262 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 LINC01555Q8NAE3 123 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 OR4Q3Q8NH05 313 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 INTS14Q96SY0 518 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 NMNAT3Q96T66 252 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 IFT46Q9NQC8 304 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SDHAF3Q9NRP4 125 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SERINC1Q9NRX5 453 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 PLEKHA6Q9Y2H5 1048 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CHST2Q9Y4C5 530 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SLC22A7Q9Y694 548 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 TP53BP1Q12888 1972 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 POM121BA6NF01 834 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 IFITM5A6NNB3 132 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 FAM171A2A8MVW0 826 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 C11orf98E9PRG8 122 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CTNSO60931 367 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 DNAJB6O75190 326 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 ZNF780AO75290 641 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 OR7A10O76100 309 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SLC2A10O95528 541 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 AMY2AP04746 511 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CSN2P05814 226 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CEACAM5P06731 702 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 ERCC1P07992 297 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 HOXB9P17482 250 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 METAP1P53582 386 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 CLDN12P56749 244 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 OC90Q02509 493 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 GLO1Q04760 184 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 GPNMBQ14956 572 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SLC35D3Q5M8T2 416 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 MRM1Q6IN84 353 aaKnown RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 ZNF425Q6IV72 752 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 ZC3H14Q6PJT7 736 aaKnown RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 SLC29A4Q7RTT9 530 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 OVCH1Q7RTY7 1134 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 C12orf40Q86WS4 652 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 AMER3Q8N944 861 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 COQ8AQ8NI60 647 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 PHOSPHO2Q8TCD6 241 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 OR1E3Q8WZA6 343 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SLC25A44Q96H78 314 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 TMEM41AQ96HV5 264 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 DHRS1Q96LJ7 313 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 UBL7Q96S82 380 aaPredicted RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 ATG5Q9H1Y0 275 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SYT4Q9H2B2 425 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SLCO5A1Q9H2Y9 848 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SYNPO2LQ9H987 977 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 MBNL1Q9NR56 388 aaKnown RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 NCDNQ9UBB6 729 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 EPHA6Q9UF33 1036 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 APOBEC3BQ9UH17 382 aaKnown RBP3.6□□□□□ -1.83
KTN1-217ENST00000554831 MLXQ9UH92 298 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 ERVK-19Q9WJR5 959 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SCN4AP35499 1836 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 TRAV1-2A0A0B4J238 106 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 A0A0J9YY10 115 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 B4DGG1 531 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 DISC1C4P0D8 188 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 AKR7A2O43488 359 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 MT-ND4P03905 459 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SRMP19623 302 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 PRKACBP22694 351 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 S100A11P31949 105 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 RORAP35398 523 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 SLC6A8P48029 635 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 VEGFCP49767 419 aa3.6□□□□□ -1.83
KTN1-217ENST00000554831 LSM11P83369 360 aaKnown RBP eCLIP3.6□□□□□ -1.83
KTN1-217ENST00000554831 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.6□□□□□ -1.838e-7■■■□□ 14.6
KTN1-217ENST00000554831 CLVS2Q5SYC1 327 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms