RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 SIRPAP78324 504 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ZIC1Q15915 447 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 VASNQ6EMK4 673 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 HIST3H2AQ7L7L0 130 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 CMTM4Q8IZR5 234 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 SYNPRQ8TBG9 265 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 NSMAFQ92636 917 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 HIST1H2ACQ93077 130 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 RNF170Q96K19 258 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 MYADMQ96S97 322 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ERVMER34-1Q9H9K5 563 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 LIN7BQ9HAP6 207 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 CYSLTR2Q9NS75 346 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 CYP8B1Q9UNU6 501 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 DTX4Q9Y2E6 619 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 NDUFB2O95178 105 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 COL9A1P20849 921 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ARL4DP49703 201 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 P2RX3P56373 397 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 FBXW4P57775 412 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 PSMA6P60900 246 aaKnown RBP10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ZNF85Q03923 595 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 SNTA1Q13424 505 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ST3GAL2Q16842 350 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ARHGAP11BQ3KRB8 267 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 FAM209AQ5JX71 171 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ALKAL2Q6UX46 152 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ZNF627Q7L945 461 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 PAQR7Q86WK9 346 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 HEATR5AQ86XA9 2040 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 REM2Q8IYK8 340 aaPredicted RBP10.91□□□□□ -0.66
XRCC3-208ENST00000554811 KDM8Q8N371 416 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 OR11H4Q8NGC9 324 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 OR4C3Q8NH37 302 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 MOSPD2Q8NHP6 518 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 PELI1Q96FA3 418 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 DGAT2Q96PD7 388 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 PRSS27Q9BQR3 290 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 MARVELD1Q9BSK0 173 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 KIR3DX1Q9H7L2 352 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ADGRL4Q9HBW9 690 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 FLRT3Q9NZU0 649 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 REV3LO60673 3130 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 TCRBV21S2A2A0A5A6 115 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 ADAM11O75078 769 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 KDM4BO94953 1096 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 OPN1LWP04000 364 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 DCTDP32321 178 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 GAB4Q2WGN9 574 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 C4orf46Q504U0 113 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 CCDC157Q569K6 752 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 DMRTC1Q5HYR2 192 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 LRRC69Q6ZNQ3 347 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 SAMD14Q8IZD0 417 aaPredicted RBP10.91□□□□□ -0.66
XRCC3-208ENST00000554811 Q9N2J8 555 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 CPNE7Q9UBL6 633 aa10.91□□□□□ -0.66
XRCC3-208ENST00000554811 FARSAQ9Y285 508 aaKnown RBP10.91□□□□□ -0.66
XRCC3-208ENST00000554811 L7N2F9 121 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 APBB3O95704 486 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ZNF250P15622 560 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ST6GAL1P15907 406 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ARHGAP11AQ6P4F7 1023 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ZNF782Q6ZMW2 699 aaPredicted RBP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 DPY19L4Q7Z388 723 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ZDHHC1Q8WTX9 485 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 KIAA1143Q96AT1 154 aaPredicted RBP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 TPSD1Q9BZJ3 242 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 NT5DC2Q9H857 520 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 FBXL3Q9UKT7 428 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 COPS3Q9UNS2 423 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ZNF879B4DU55 563 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 BHLHE40O14503 412 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 EGFP01133 1207 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 IL9P15248 144 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 EN2P19622 333 aaPredicted RBP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 RBMS1P29558 406 aaKnown RBP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 RAD52P43351 418 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 LSSP48449 732 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 MAZP56270 477 aaKnown RBP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 FOXL2P58012 376 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 PITPNAQ00169 270 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 MLC1Q15049 377 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 SCGB2B2Q4G0G5 96 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 NDUFAF7Q7L592 441 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 COMMD2Q86X83 199 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 OR2T4Q8NH00 348 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ADOQ96SZ5 270 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 PBX4Q9BYU1 374 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 FAM60AQ9NP50 221 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 PRDM9Q9NQV7 894 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 LAMP5Q9UJQ1 280 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 ZMIZ1Q9ULJ6 1067 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 AHCTF1Q8WYP5 2266 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 KIAA1671Q9BY89 1806 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 HCRTR2O43614 444 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 CDC40O60508 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
XRCC3-208ENST00000554811 NGFRP08138 427 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 DUSP8Q13202 625 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 PXDC1Q5TGL8 231 aa10.9□□□□□ -0.66
XRCC3-208ENST00000554811 LNX2Q8N448 690 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms