RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SORBS1Q9BX66 1292 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TM6SF2Q9BZW4 377 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ATG10Q9H0Y0 220 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 OR2AG1Q9H205 316 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SLCO5A1Q9H2Y9 848 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ACKR4Q9NPB9 350 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 PRMT8Q9NR22 394 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DDX28Q9NUL7 540 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SPHK1Q9NYA1 384 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF224Q9NZL3 707 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF391Q9UJN7 358 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CARHSP1Q9Y2V2 147 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF337Q9Y3M9 751 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ANGPTL3Q9Y5C1 460 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM272A0A1B0GTI8 110 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 A0A1W2PPC1 479 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 IFITM5A6NNB3 132 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 E9PI62 339 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 M0R3H8 397 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MAGEB4O15481 346 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZNF264O43296 627 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 KDM1AO60341 852 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CDC40O60508 579 aaKnown RBP eCLIP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SRPX2O60687 465 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CXCL14O95715 111 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 HIST1H2ABP04908 130 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 HNRNPCP07910 306 aaKnown RBP eCLIP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 EPCAMP16422 314 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ALOX5APP20292 161 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GTF2E2P29084 291 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 EVI2BP34910 448 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RECQLP46063 649 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 OR1E2P47887 323 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RGS19P49795 217 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GNG2P59768 71 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 NANOS3P60323 173 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CYP4F2P78329 520 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GPLD1P80108 840 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RGS1Q08116 209 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RUNX3Q13761 415 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DDX39BQ13838 428 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ST3GAL2Q16842 350 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TATDN3Q17R31 274 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 DEFB115Q30KQ5 88 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RAET1GQ6H3X3 334 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 HIST3H2AQ7L7L0 130 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 OR2W3Q7Z3T1 314 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 RYBPQ8N488 228 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GPR156Q8NFN8 814 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CADM4Q8NFZ8 388 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GTF3AQ92664 365 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 EXT2Q93063 718 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 HIST1H2ACQ93077 130 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 CCDC74AQ96AQ1 378 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ZG16BQ96DA0 208 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 GAS2L1Q99501 681 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 SPON2Q9BUD6 331 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 ALG8Q9BVK2 526 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 KRCC1Q9NPI7 259 aaPredicted RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 IL36GQ9NZH8 169 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 MRM2Q9UI43 246 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TSR3Q9UJK0 312 aaKnown RBP3.13□□□□□ -1.91
SEC23A-207ENST00000554615 COPS3Q9UNS2 423 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 FIS1Q9Y3D6 152 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 V9GYS6 101 aa3.13□□□□□ -1.91
SEC23A-207ENST00000554615 TMEM14DPA8MWL7 114 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ALG1L2C9J202 215 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HPGDSO60760 199 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 STX11O75558 287 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SLC22A5O76082 557 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 NUDT14O95848 222 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 MT-ND5P03915 603 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HKR1P10072 659 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CD8BP10966 210 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PNMTP11086 282 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 GNSP15586 552 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PSMB9P28065 219 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CMPK1P30085 196 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SDHAP31040 664 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PRPS1P60891 318 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 FPGSQ05932 587 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 HNRNPA0Q13151 305 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 PPA1Q15181 289 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 MSMO1Q15800 293 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 C10orf128Q5T292 105 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 C18orf63Q68DL7 685 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 THOC7Q6I9Y2 204 aaKnown RBP3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ULK3Q6PHR2 472 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 UQCC3Q6UW78 93 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 LAPTM4BQ86VI4 370 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 SNX29P2Q8IUI4 249 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 STX19Q8N4C7 294 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ACBD7Q8N6N7 88 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 TCEANCQ8N8B7 351 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 YIPF7Q8N8F6 280 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 ZDHHC22Q8N966 263 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 CAMKVQ8NCB2 501 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 NUBPLQ8TB37 319 aa3.12□□□□□ -1.91
SEC23A-207ENST00000554615 FAM216AQ8WUB2 273 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms