RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 ZFHX2Q9C0A1 2572 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ANKRD36A6QL64 1941 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TMEM221A6NGB7 291 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HIDE1A8MVS5 230 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 M0R296 226 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 KDELR3O43731 214 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HLA-DMAP28067 261 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 KCNC1P48547 511 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 GNMTQ14749 295 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DPY19L1Q2PZI1 675 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CATSPEREQ5SY80 951 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CARM1Q86X55 608 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 OR5AR1Q8NGP9 310 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RDH5Q92781 318 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 S100A16Q96FQ6 103 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ACY3Q96HD9 319 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 MAELQ96JY0 434 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SLC22A12Q96S37 553 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DOHHQ9BU89 302 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HDHD5Q9BXW7 423 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 H0YIV9 168 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF207O43670 478 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 IFNA1P01562 189 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 S1PR1P21453 382 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HTR5AP47898 357 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 VEZF1Q14119 521 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 GGTLC2Q14390 218 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HLA-BQ31612 363 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PLBD1Q6P4A8 553 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 NHLRC1Q6VVB1 395 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DEDD2Q8WXF8 326 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 DCSTAMPQ9H295 470 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 LRRN3Q9H3W5 708 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 GAB2Q9UQC2 676 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TRAV27A0A087WT01 109 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 UPP1Q16831 310 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RNASEKQ6P5S7 137 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 AAED1Q7RTV5 226 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SLC41A3Q96GZ6 507 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CACNA1HO95180 2353 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 LOC100130705A0A1B0GUX0 176 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CLDN11O75508 207 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 IL9P15248 144 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CKMT2P17540 419 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HOXA10P31260 410 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 BMPR1AP36894 532 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SLC19A1P41440 591 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 HK3P52790 923 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CLDN12P56749 244 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SLC36A3Q495N2 470 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TANGO2Q6ICL3 276 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 UNC93AQ86WB7 457 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SDR9C7Q8NEX9 313 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TFAP2CQ92754 450 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CA10Q9NS85 328 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PTTG2Q9NZH5 202 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 UBIAD1Q9Y5Z9 338 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PREX2Q70Z35 1606 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CHRNB2P17787 502 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 KDELR2P33947 212 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CSNK1A1P48729 337 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 INSM1Q01101 510 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ELOCQ15369 112 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ABHD12BQ7Z5M8 362 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF595Q8IYB9 648 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CISD2Q8N5K1 135 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CMTM2Q8TAZ6 248 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 EBF4Q9BQW3 602 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CNIH4Q9P003 139 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TMPRSS11EQ9UL52 423 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TDRD15B5MCY1 1934 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 MAGEB4O15481 346 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CYTIPO60759 359 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 F8A1P23610 371 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 RPS27P42677 84 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 APOFQ13790 326 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 EIF5AL1Q6IS14 154 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ZNF517Q6ZMY9 492 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CLEC20AQ6ZU45 233 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CCDC28AQ8IWP9 274 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 GLIS1Q8NBF1 620 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 MOB1AQ9H8S9 216 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 FBLL1A6NHQ2 334 aaKnown RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CGB1A6NKQ9 187 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 TNFSF15O95150 251 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CPN1P15169 458 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CD46P15529 392 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 LAP3P28838 519 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 CRABP1P29762 137 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 PNLIPRP3Q17RR3 467 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SLC35D2Q76EJ3 337 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 MFSD9Q8NBP5 474 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 FAM213BQ8TBF2 198 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 MAL2Q969L2 176 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ZBED6CLQ96FA7 236 aaPredicted RBP3.08□□□□□ -1.92
SYNE2-212ENST00000554584 SIGLEC6O43699 453 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 KCNK5O95279 499 aa3.08□□□□□ -1.92
SYNE2-212ENST00000554584 ERP29P30040 261 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms