RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CDK6Q00534 326 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 SLC17A1Q14916 467 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 TSC22D1Q15714 1073 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 NCMAPQ5T1S8 102 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 METTL21CQ5VZV1 264 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 DHRS4L2Q6PKH6 230 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 C6orf89Q6UWU4 347 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 PRSS57Q6UWY2 283 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 SEZ6L2Q6UXD5 910 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 DLEU7Q6UYE1 221 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 ATG4DQ86TL0 474 aaPredicted RBP9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 SERPINA11Q86U17 422 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 KRTAP1-3Q8IUG1 177 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 CCDC103Q8IW40 242 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 CADM2Q8N3J6 435 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 DPP10Q8N608 796 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 ZNF433Q8N7K0 673 aaPredicted RBP9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 BHLHE22Q8NFJ8 381 aaPredicted RBP9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 NFKBIDQ8NI38 313 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 STK35Q8TDR2 534 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 TMEM45BQ96B21 275 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 C3orf49Q96BT1 292 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 ZNF775Q96BV0 537 aaPredicted RBP9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 CPPED1Q9BRF8 314 aaPredicted RBP9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 SF3B5Q9BWJ5 86 aaKnown RBP9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 ASB6Q9NWX5 421 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 TAS2R16Q9NYV7 291 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 RNF115Q9Y4L5 304 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 FLVCR1Q9Y5Y0 555 aa9.19□□□□□ -0.94
PTCD2P1-201ENST00000554393 NSD1Q96L73 2696 aaPredicted RBP9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 PRORSD1PA6NEY8 169 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 AQP7P3A6NL99 342 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 FRS3O43559 492 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 RAMP1O60894 148 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 FZD7O75084 574 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 LYZL6O75951 148 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 VAMP5O95183 116 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 CD3EP07766 207 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 PRG2P13727 222 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 PAX1P15863 534 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 GGT1P19440 569 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 SLC6A2P23975 617 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 CEACAM7Q14002 265 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 PPA1Q15181 289 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 OR7A5Q15622 319 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 OTUD3Q5T2D3 398 aaPredicted RBP9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 C1orf140Q5VVS0 124 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 USF3Q68DE3 2245 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 OR7E24Q6IFN5 339 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 C5orf46Q6UWT4 87 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 C10orf111Q8N326 155 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 LSMEM1Q8N8F7 131 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 HIPK4Q8NE63 616 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 WFDC11Q8NEX6 87 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 MUCL1Q96DR8 90 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 DNAJA3Q96EY1 480 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 ZNF607Q96SK3 696 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 TAPBPLQ9BX59 468 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 GSX2Q9BZM3 304 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 HEATR1Q9H583 2144 aaKnown RBP9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 IKZF5Q9H5V7 419 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 NPHS2Q9NP85 383 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 DCTN4Q9UJW0 460 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 NDUFAF1Q9Y375 327 aa9.18□□□□□ -0.94
PTCD2P1-201ENST00000554393 NBEAL1Q6ZS30 2694 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 PDLIM1O00151 329 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 ANGPT2O15123 496 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 SERPINB7O75635 380 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 AHSA1O95433 338 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 PLAUP00749 431 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 C8BP07358 591 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 ADSLP30566 484 aaPredicted RBP9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 NTF4P34130 210 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 PCBP3P57721 371 aaKnown RBP9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 RBBP4Q09028 425 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 SCARB2Q14108 478 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 CAPRIN1Q14444 709 aaKnown RBP9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 STK11Q15831 433 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 ADRM1Q16186 407 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 RUNDC3AQ59EK9 446 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 FAM91A1Q658Y4 838 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 CASP12Q6UXS9 341 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 DHDDSQ86SQ9 333 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 P3H2Q8IVL5 708 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 UBE2J2Q8N2K1 259 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 C17orf78Q8N4C9 275 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 TMEM99Q8N816 258 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 POMGNT2Q8NAT1 580 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 C11orf65Q8NCR3 313 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 C1orf162Q8NEQ5 155 aaPredicted RBP9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 OR9K2Q8NGE7 335 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 MFSD8Q8NHS3 518 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 TMEM171Q8WVE6 324 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 DNAJA4Q8WW22 397 aaPredicted RBP9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 AKAP1Q92667 903 aaKnown RBP eCLIP9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 FBXW5Q969U6 566 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 BOD1Q96IK1 185 aa9.17□□□□□ -0.94
PTCD2P1-201ENST00000554393 RADILQ96JH8 1075 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms