RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SPATA5L1Q9BVQ7 753 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 TRIM15Q9C019 465 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 KLHL4Q9C0H6 718 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 OR11A1Q9GZK7 315 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 OR10A4Q9H209 315 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 IKZF5Q9H5V7 419 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 EMC3Q9P0I2 261 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 ING1Q9UK53 422 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-211ENST00000554310 TRAPPC4Q9Y296 219 aa11.62□□□□□ -0.55
SHMT2-211ENST00000554310 IGKV3D-15A0A087WSY6 115 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 TMEM72A0PK05 275 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 AQP12BA6NM10 295 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 GKN3PP0CG01 181 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 TCN1P20061 433 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-211ENST00000554310 PSMB1P20618 241 aaKnown RBP11.61□□□□□ -0.55
SHMT2-211ENST00000554310 CRYGSP22914 178 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 MSX2P35548 267 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-211ENST00000554310 ACAA2P42765 397 aaKnown RBP11.61□□□□□ -0.55
SHMT2-211ENST00000554310 GTF2A1P52655 376 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-211ENST00000554310 SCARB2Q14108 478 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 PDK3Q15120 406 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 RUNDC3AQ59EK9 446 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 OGFRL1Q5TC84 451 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-211ENST00000554310 LCN8Q6JVE9 175 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 PAMR1Q6UXH9 720 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 STAC2Q6ZMT1 411 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 NUFIP2Q7Z417 695 aaKnown RBP11.61□□□□□ -0.55
SHMT2-211ENST00000554310 SPATA24Q86W54 205 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 DHFR2Q86XF0 187 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 AQP12AQ8IXF9 295 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 C10orf111Q8N326 155 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 CLIP4Q8N3C7 705 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 CADM2Q8N3J6 435 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 NRGNQ92686 78 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 CGREF1Q99674 301 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 ADAM19Q9H013 955 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 PCDHAC1Q9H158 963 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 RIMS3Q9UJD0 308 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 ANGPT4Q9Y264 503 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 GPR52Q9Y2T5 361 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 CHST2Q9Y4C5 530 aa11.61□□□□□ -0.55
SHMT2-211ENST00000554310 HIVEP1P15822 2718 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 GPR171O14626 319 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 EIF1BO60739 113 aaKnown RBP11.6□□□□□ -0.55
SHMT2-211ENST00000554310 KLK2P20151 261 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 CCNA2P20248 432 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 CXCR1P25024 350 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 IDUAP35475 653 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 OR3A2P47893 321 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 SLC16A1P53985 500 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 SLC35A1P78382 337 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 RBBP4Q09028 425 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 CAPRIN1Q14444 709 aaKnown RBP11.6□□□□□ -0.55
SHMT2-211ENST00000554310 P2RY6Q15077 328 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 TRIP10Q15642 601 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 FXNQ16595 210 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 CYP51A1Q16850 503 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 DHRS4L2Q6PKH6 230 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 IZUMO2Q6UXV1 221 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 GALNT5Q7Z7M9 940 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 SERPINA11Q86U17 422 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 GABRG1Q8N1C3 465 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 C11orf65Q8NCR3 313 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 LRGUKQ96M69 825 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF300Q96RE9 604 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF607Q96SK3 696 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 POTEKPQ9BYX7 375 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 ACTR6Q9GZN1 396 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 ACTR3BQ9P1U1 418 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 ST6GALNAC2Q9UJ37 374 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 ITGB1BP2Q9UKP3 347 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 ITPR3Q14573 2671 aa11.6□□□□□ -0.55
SHMT2-211ENST00000554310 CELSR1Q9NYQ6 3014 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 AKAP9Q99996 3911 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 ZC3H12DA2A288 527 aaKnown RBP11.59□□□□□ -0.55
SHMT2-211ENST00000554310 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 DEFB108AA8MXU0 73 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 GCM2O75603 506 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-211ENST00000554310 SERPINB7O75635 380 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 CNOT4O95628 575 aaKnown RBP11.59□□□□□ -0.55
SHMT2-211ENST00000554310 PRG2P13727 222 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 PEX2P28328 305 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 GSK3BP49841 420 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 OR2B6P58173 313 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 MTPNP58546 118 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 POU4F3Q15319 338 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 TESK1Q15569 626 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 ADRM1Q16186 407 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 LPCAT4Q643R3 524 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 NANOGP8Q6NSW7 305 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 PAQR6Q6TCH4 344 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 Q6ZT83 130 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 SLC30A8Q8IWU4 369 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 STEAP2Q8NFT2 490 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 OR8J3Q8NGG0 315 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 C3orf49Q96BT1 292 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
SHMT2-211ENST00000554310 HDHD5Q9BXW7 423 aa11.59□□□□□ -0.55
SHMT2-211ENST00000554310 EVA1AQ9H8M9 152 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms