RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 DSPPQ9NZW4 1301 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 A8MVM7 634 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 AKR7A3O95154 331 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 GKN3PP0CG01 181 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 ETFAP13804 333 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 ACAA2P42765 397 aaKnown RBP16.45■□□□□ 0.22
CPSF2-203ENST00000554290 DSTNP60981 165 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 CHRNB3Q05901 458 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 ZNF836Q6ZNA1 936 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 OR9K2Q8NGE7 335 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 MGARPQ8TDB4 240 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 ITCHQ96J02 903 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 TPT1P8Q9HAU6 139 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 ZIM2Q9NZV7 527 aa16.45■□□□□ 0.22
CPSF2-203ENST00000554290 AQP7P3A6NL99 342 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 H7C417 338 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 KRT33AO76009 404 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 VAMP5O95183 116 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 BCHEP06276 602 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 TFPTP0C1Z6 253 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 NCF2P19878 526 aaPredicted RBP16.44■□□□□ 0.22
CPSF2-203ENST00000554290 MVDP53602 400 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 MAPK11Q15759 364 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 RNF220Q5VTB9 566 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 B3GLCTQ6Y288 498 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 MSANTD1Q6ZTZ1 278 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 GPAT4Q86UL3 456 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 ZIC4Q8N9L1 334 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 OR10H5Q8NGA6 315 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 SLC38A5Q8WUX1 472 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 MAELQ96JY0 434 aaKnown RBP16.44■□□□□ 0.22
CPSF2-203ENST00000554290 SLC6A13Q9NSD5 602 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 NKIRAS1Q9NYS0 192 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 ZNF443Q9Y2A4 671 aaPredicted RBP16.44■□□□□ 0.22
CPSF2-203ENST00000554290 PMF1-BGLAPU3KQ54 211 aa16.44■□□□□ 0.22
CPSF2-203ENST00000554290 IGHV4-30-2A0A087WSY4 118 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 A0A096LPI6 279 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 A0A0G2JPF8 293 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 HNRNPCL2B2RXH8 293 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 HNRNPCL3B7ZW38 293 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 HNRNPCL1O60812 293 aaKnown RBP16.43■□□□□ 0.22
CPSF2-203ENST00000554290 IFNA2P01563 188 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 HNRNPCL4P0DMR1 293 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 CDH2P19022 906 aaPredicted RBP16.43■□□□□ 0.22
CPSF2-203ENST00000554290 APOBEC3AP31941 199 aaPredicted RBP16.43■□□□□ 0.22
CPSF2-203ENST00000554290 SLC18A1P54219 525 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 CXXC5Q7LFL8 322 aaKnown RBP16.43■□□□□ 0.22
CPSF2-203ENST00000554290 HIPK1Q86Z02 1210 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 SPATA3Q8NHX4 192 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 AURKBQ96GD4 344 aaPredicted RBP16.43■□□□□ 0.22
CPSF2-203ENST00000554290 ZNF385AQ96PM9 386 aaKnown RBP16.43■□□□□ 0.22
CPSF2-203ENST00000554290 SPATA9Q9BWV2 254 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 MANSC1Q9H8J5 431 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 SDR39U1Q9NRG7 319 aaPredicted RBP16.43■□□□□ 0.22
CPSF2-203ENST00000554290 TMEM45AQ9NWC5 275 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 ADPRHL2Q9NX46 363 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 IFT52Q9Y366 437 aa16.43■□□□□ 0.22
CPSF2-203ENST00000554290 OR6C65A6NJZ3 312 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 A8MV72 311 aaPredicted RBP16.42■□□□□ 0.22
CPSF2-203ENST00000554290 UBDO15205 165 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 SLC25A16P16260 332 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 PAX7P23759 505 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 POLR2JP52435 117 aaKnown RBP16.42■□□□□ 0.22
CPSF2-203ENST00000554290 BNIP2Q12982 314 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 SLC9B1Q4ZJI4 515 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 C6orf10Q5SRN2 563 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 C1orf140Q5VVS0 124 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 CLIP4Q8N3C7 705 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 FAM168AQ92567 244 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 TMEM19Q96HH6 336 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 BOD1Q96IK1 185 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 OBP2BQ9NPH6 170 aa16.42■□□□□ 0.22
CPSF2-203ENST00000554290 ELOA3DA6NLF2 546 aaPredicted RBP16.41■□□□□ 0.22
CPSF2-203ENST00000554290 ZNF500O60304 480 aaPredicted RBP16.41■□□□□ 0.22
CPSF2-203ENST00000554290 PRG2P13727 222 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 SLC25A3Q00325 362 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 ELOA3BQ3SY89 546 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 HMBOX1Q6NT76 420 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 PODNL1Q6PEZ8 512 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 CREB3L2Q70SY1 520 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 MIER2Q8N344 545 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 ELOA3Q8NG57 546 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 STK35Q8TDR2 534 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 HTRA1Q92743 480 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 TNFRSF13CQ96RJ3 184 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 KCNS3Q9BQ31 491 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 RAD21L1Q9H4I0 556 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 RASD1Q9Y272 281 aa16.41■□□□□ 0.22
CPSF2-203ENST00000554290 ZNF587BE7ETH6 402 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 ATP6V1G2-DDX39BF2Z307 99 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 KLF11O14901 512 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 FRS3O43559 492 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 GPRIN2O60269 458 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 AHSA1O95433 338 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 CSF3P09919 207 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 EFNA4P52798 201 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 MAGOHP61326 146 aaKnown RBP16.4■□□□□ 0.22
CPSF2-203ENST00000554290 LOXL1Q08397 574 aaPredicted RBP16.4■□□□□ 0.22
CPSF2-203ENST00000554290 CHRFAM7AQ494W8 412 aa16.4■□□□□ 0.22
CPSF2-203ENST00000554290 GTDC1Q4AE62 458 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms