RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 WDR92Q96MX6 357 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 ZFP3Q96NJ6 502 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF649Q9BS31 505 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 TEX12Q9BXU0 123 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 BCL2L14Q9BZR8 327 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 FN3KQ9H479 309 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 NPDC1Q9NQX5 325 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-207ENST00000553837 POLE3Q9NRF9 147 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 CTSFQ9UBX1 484 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 IL20RAQ9UHF4 553 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 PRR23D1E9PI22 279 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-207ENST00000553837 DVL2O14641 736 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 CH25HO95992 272 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 HOXC4P09017 264 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-207ENST00000553837 SMIM6P0DI80 62 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 PRR23D2P0DMB1 279 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-207ENST00000553837 GNSP15586 552 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 DRD5P21918 477 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 S100A11P31949 105 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 IFNGR2P38484 337 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 GPR4P46093 362 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 STARP49675 285 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 DGCR2P98153 550 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 TSPAN31Q12999 210 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 GPR18Q14330 331 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 HLXQ14774 488 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-207ENST00000553837 DUSP5Q16690 384 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 FAM69AQ5T7M9 428 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 ALKAL2Q6UX46 152 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 BEND4Q6ZU67 534 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 GDF7Q7Z4P5 450 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 LRRC25Q8N386 305 aaPredicted RBP11.28□□□□□ -0.6
SHMT2-207ENST00000553837 OR10G6Q8NH81 332 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 GNPDA2Q8TDQ7 276 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 ADAMTS15Q8TE58 950 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 TMEM255BQ8WV15 326 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 MRPL38Q96DV4 380 aaKnown RBP11.28□□□□□ -0.6
SHMT2-207ENST00000553837 ARSGQ96EG1 525 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 IFT27Q9BW83 186 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 JAM3Q9BX67 310 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 FBXO34Q9NWN3 711 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 BABAM2Q9NXR7 383 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 NKIRAS2Q9NYR9 191 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 NTMQ9P121 344 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 PILRAQ9UKJ1 303 aa11.28□□□□□ -0.6
SHMT2-207ENST00000553837 OR6C74A6NCV1 312 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 SLC9B1P1A6NJY1 282 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 ANXA2P2A6NMY6 339 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 POM121CA8CG34 1229 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 TNFSF14O43557 240 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 GSTZ1O43708 216 aaPredicted RBP11.27□□□□□ -0.6
SHMT2-207ENST00000553837 MAZP56270 477 aaKnown RBP11.27□□□□□ -0.6
SHMT2-207ENST00000553837 KLF9Q13886 244 aaPredicted RBP11.27□□□□□ -0.6
SHMT2-207ENST00000553837 MAPK14Q16539 360 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 ALG11Q2TAA5 492 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.6
SHMT2-207ENST00000553837 AADACL4Q5VUY2 407 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 SLC30A6Q6NXT4 461 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 ATRAIDQ6UW56 229 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF836Q6ZNA1 936 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 Q6ZTK2 550 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 NRMQ8IXM6 262 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 OR2L13Q8N349 312 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 SLC38A3Q99624 504 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 MCHR1Q99705 422 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF251Q9BRH9 671 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.6
SHMT2-207ENST00000553837 PIPOXQ9P0Z9 390 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 MGAT4CQ9UBM8 478 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 DAPP1Q9UN19 280 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 CAMK2AQ9UQM7 478 aa11.27□□□□□ -0.6
SHMT2-207ENST00000553837 ZNF443Q9Y2A4 671 aaPredicted RBP11.27□□□□□ -0.6
SHMT2-207ENST00000553837 A0A1B0GUH1 482 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 A0A1B0GW55 424 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 TMEM82A0PJX8 343 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 GSAPA4D1B5 854 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 CDC42EP2O14613 210 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 KLF4O43474 513 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 SDC3O75056 442 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 SLC2A10O95528 541 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 WNT1P04628 370 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 SLC35G6P0C7Q6 338 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 DUX4L2P0CJ85 424 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 DUX4L3P0CJ86 424 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 DUX4L4P0CJ87 422 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 DUX4L5P0CJ88 424 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 DUX4L6P0CJ89 424 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 DUX4L7P0CJ90 424 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 PRG2P13727 222 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 SELLP14151 372 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 CPN1P15169 458 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 NDUFV2P19404 249 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 PSMB1P20618 241 aaKnown RBP11.27□□□□□ -0.61
SHMT2-207ENST00000553837 ZNF136P52737 540 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 RGS8P57771 180 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-207ENST00000553837 TRAM1Q15629 374 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 SFRP5Q5T4F7 317 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 FHL5Q5TD97 284 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 FIGLAQ6QHK4 219 aa11.27□□□□□ -0.61
SHMT2-207ENST00000553837 C5orf46Q6UWT4 87 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms