RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 ITPR3Q14573 2671 aa9.04□□□□□ -0.96
HNRNPC-208ENST00000553753 TEP1Q99973 2627 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 F8P00451 2351 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 AQP7P3A6NL99 342 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 KLF4O43474 513 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 LYZL6O75951 148 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 AHSA1O95433 338 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 LGI1O95970 557 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 IGHV3-9P01782 118 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 OPN1SWP03999 348 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 C8BP07358 591 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 PNMTP11086 282 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 PCGF2P35227 344 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 GZMMP51124 257 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 ART1P52961 327 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 KEAP1Q14145 624 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 VMACQ2NL98 169 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 BEX5Q5H9J7 111 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 FAM91A1Q658Y4 838 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 PAMR1Q6UXH9 720 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 SPNS3Q6ZMD2 512 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 PATL1Q86TB9 770 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 GPAT4Q86UL3 456 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 UBE2J2Q8N2K1 259 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 MFSD8Q8NHS3 518 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 HSD17B8Q92506 261 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 WFDC6Q9BQY6 131 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 SF3B5Q9BWJ5 86 aaKnown RBP9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 TMEM27Q9HBJ8 222 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 PARPBPQ9NWS1 579 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 GID8Q9NWU2 228 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 SLC9A8Q9Y2E8 581 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 FLVCR1Q9Y5Y0 555 aa9.03□□□□□ -0.96
HNRNPC-208ENST00000553753 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 OR2T1O43869 369 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 TPST2O60704 377 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 CCDC22O60826 627 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 VAMP5O95183 116 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 RAF1P04049 648 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 COX5AP20674 150 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 IGHV1-2P23083 117 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 RPS5P46782 204 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 NR1H2P55055 460 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 OR1Q1Q15612 314 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 TAB1Q15750 504 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 ALKBH2Q6NS38 261 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 C5orf46Q6UWT4 87 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 BHLHA15Q7RTS1 189 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 RANBP3LQ86VV4 465 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 CALHM3Q86XJ0 350 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 WFDC8Q8IUA0 241 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 RP9Q8TA86 221 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC26A7Q8TE54 656 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC38A4Q969I6 547 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC25A36Q96CQ1 311 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 KTI12Q96EK9 354 aaPredicted RBP9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 SLC47A1Q96FL8 570 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 HS3ST6Q96QI5 342 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 FOXC2Q99958 501 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 PTDSS2Q9BVG9 487 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 ASB6Q9NWX5 421 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 SELENONQ9NZV5 590 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 MALT1Q9UDY8 824 aa9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 PRRC2AP48634 2157 aaKnown RBP9.02□□□□□ -0.97
HNRNPC-208ENST00000553753 A0A087WUJ7 227 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 A0A0B4J2E0 115 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 A0A1B0GX12 115 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 FTCDNL1E5RQL4 147 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 ATE1O95260 518 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 GGT1P19440 569 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 LOXP28300 417 aaPredicted RBP9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 P2RY4P51582 365 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 SEC24CP53992 1094 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 FAPQ12884 760 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 VEZF1Q14119 521 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 FAM69AQ5T7M9 428 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 CASP12Q6UXS9 341 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 CCDC80Q76M96 950 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 POU5F2Q8N7G0 328 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 GPR32P1Q8NGA4 272 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 OR9K2Q8NGE7 335 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 OR6T1Q8NGN1 323 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 RNF217Q8TC41 542 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 RASSF5Q8WWW0 418 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 TAMM41Q96BW9 452 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 MBD6Q96DN6 1003 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 PLPPR2Q96GM1 343 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 ZNF583Q96ND8 569 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 ELAC2Q9BQ52 826 aaKnown RBP9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 NGBQ9NPG2 151 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 IGKV1D-42A0A075B6H8 117 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 M0R3H8 397 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 FMO6PO60774 539 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 GTF2E2P29084 291 aaKnown RBP9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 CRYBA2P53672 197 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 CDH12P55289 794 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 STK11Q15831 433 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 NRF1Q16656 503 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 TIMM23BQ5SRD1 257 aa9.01□□□□□ -0.97
HNRNPC-208ENST00000553753 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms