RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 FTH1P02794 183 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 FABP1P07148 127 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 FCGR3AP08637 254 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ANXA5P08758 320 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 DBTP11182 482 aaKnown RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 MAGP20916 626 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 TBXA2RP21731 343 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 GTF2H1P32780 548 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 KIR3DL2P43630 455 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 KCNJ3P48549 501 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 STK19P49842 368 aaPredicted RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 GNG10P50151 68 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 OSTNP61366 133 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 SRPXP78539 464 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 MRPS25P82663 173 aaKnown RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 IRF8Q02556 426 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ZNF33BQ06732 778 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 CDH17Q12864 832 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ILKQ13418 452 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 LY6DQ14210 128 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 CHI3L2Q15782 390 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 SYPL1Q16563 259 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ZFP69Q49AA0 526 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 MARCH8Q5T0T0 291 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 FAM151BQ6UXP7 276 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 Q6ZPB1 254 aaPredicted RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 SLC35D2Q76EJ3 337 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 TSEN54Q7Z6J9 526 aaKnown RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 NR2C2APQ86WQ0 139 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ZNF677Q86XU0 584 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 VSTM4Q8IW00 320 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 IQCKQ8N0W5 287 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 METTL4Q8N3J2 472 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 PQLC3Q8N755 202 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ZNF614Q8N883 585 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 SAMD12Q8N8I0 201 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 GATSQ8NAP1 163 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 C19orf18Q8NEA5 215 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 PRSS33Q8NF86 280 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 PROKR2Q8NFJ6 384 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 OR2T6Q8NHC8 308 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 FLVCR1-AS1Q8TAF5 88 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 FNDC8Q8TC99 324 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ELMO1Q92556 727 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 TAF15Q92804 592 aaKnown RBP eCLIP3.17□□□□□ -1.9
TDP1-207ENST00000553617 CCDC124Q96CT7 223 aaKnown RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 ASB9Q96DX5 294 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 B3GALT6Q96L58 329 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 AGAP4Q96P64 663 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 CCT8L2Q96SF2 557 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 C7orf50Q9BRJ6 194 aaKnown RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 CENPKQ9BS16 269 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 CABLES2Q9BTV7 478 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 TM6SF2Q9BZW4 377 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 OR51B6Q9H340 312 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ELOVL6Q9H5J4 265 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 RANBP3Q9H6Z4 567 aaPredicted RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 FOLH1BQ9HBA9 442 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 PARVBQ9HBI1 364 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ADGRL4Q9HBW9 690 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ESM1Q9NQ30 184 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 TREX1Q9NSU2 369 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 C20orf96Q9NUD7 363 aaPredicted RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 PIPOXQ9P0Z9 390 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 SLC17A7Q9P2U7 560 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 GALPQ9UBC7 116 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 APOBEC3BQ9UH17 382 aaKnown RBP3.17□□□□□ -1.9
TDP1-207ENST00000553617 MLXQ9UH92 298 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 CLEC2DQ9UHP7 191 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 ANAPC7Q9UJX3 599 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 RARRES3Q9UL19 164 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 PIGLQ9Y2B2 252 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 FBXO7Q9Y3I1 522 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 CDHR2Q9BYE9 1310 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 SALL1Q9NSC2 1324 aa3.17□□□□□ -1.9
TDP1-207ENST00000553617 RALGAPA1Q6GYQ0 2036 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 TRGV8A0A0C4DH27 118 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 MGAT4DA6NG13 374 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 IFITM10A6NMD0 228 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 A8MUA0 341 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 SERPINE3A8MV23 424 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 KRTAP29-1A8MX34 341 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 ERVV-1B6SEH8 477 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 PRAMEF26H0Y7S4 382 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 K7ERI5 159 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 NTN3O00634 580 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 DYNC1I1O14576 645 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 RAMP1O60894 148 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 H6PDO95479 791 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 JCHAINP01591 159 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 IFNA6P05013 189 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 CRYGBP07316 175 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 ERCC1P07992 297 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 HCKP08631 526 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 CD3GP09693 182 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 H2AFXP16104 143 aaPredicted RBP3.16□□□□□ -1.9
TDP1-207ENST00000553617 GSTM3P21266 225 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 IGFBP5P24593 272 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 CALML3P27482 149 aa3.16□□□□□ -1.9
TDP1-207ENST00000553617 ACTR1BP42025 376 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms