RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 PIP5K1AQ99755 562 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 TMEM120AQ9BXJ8 343 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 HDHD5Q9BXW7 423 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 PIF1Q9H611 641 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 SLC25A15Q9Y619 301 aa16.02■□□□□ 0.16
SHMT2-206ENST00000553529 FLNAP21333 2647 aaKnown RBP16.02■□□□□ 0.15
SHMT2-206ENST00000553529 ZFHX3Q15911 3703 aa16.02■□□□□ 0.15
SHMT2-206ENST00000553529 A0A1B0GWA3 101 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 OR5H1A6NKK0 313 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 AQP7P3A6NL99 342 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 FTCDNL1E5RQL4 147 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 LRRN3E7EW58 273 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 M0R3H8 397 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 ABCD4O14678 606 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 CD3EP07766 207 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 DANCRP0C864 163 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 GPX2P18283 190 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 CLK1P49759 484 aaKnown RBP16.01■□□□□ 0.15
SHMT2-206ENST00000553529 GABRA6Q16445 453 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 EPHX4Q8IUS5 362 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 MAPK1IP1LQ8NDC0 245 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 OR4D11Q8NGI4 311 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 PIGTQ969N2 578 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 TRIM2Q9C040 744 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 MALT1Q9UDY8 824 aa16.01■□□□□ 0.15
SHMT2-206ENST00000553529 CIB4A0PJX0 185 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 A8MVM7 634 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 GPIP06744 558 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 PNMTP11086 282 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 UQCRBP14927 111 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 COPZ1P61923 177 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 TUBA1BP68363 451 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 TUBA4AP68366 448 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 NPTX1Q15818 432 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 ZNF672Q499Z4 452 aaPredicted RBP16■□□□□ 0.15
SHMT2-206ENST00000553529 HIKESHIQ53FT3 197 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 REEP3Q6NUK4 255 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 TUBA1AQ71U36 451 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 RBM45Q8IUH3 476 aaKnown RBP16■□□□□ 0.15
SHMT2-206ENST00000553529 ZNF611Q8N823 705 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 GPR32P1Q8NGA4 272 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 PMM1Q92871 262 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 TAAR8Q969N4 342 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 ALKBH3Q96Q83 286 aaPredicted RBP16■□□□□ 0.15
SHMT2-206ENST00000553529 NAA11Q9BSU3 229 aaPredicted RBP16■□□□□ 0.15
SHMT2-206ENST00000553529 FANCFQ9NPI8 374 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 FGFR1OP2Q9NVK5 253 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 ARGLU1Q9NWB6 273 aaPredicted RBP16■□□□□ 0.15
SHMT2-206ENST00000553529 ASB6Q9NWX5 421 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 GMPR2Q9P2T1 348 aaKnown RBP16■□□□□ 0.15
SHMT2-206ENST00000553529 GDF2Q9UK05 429 aaPredicted RBP16■□□□□ 0.15
SHMT2-206ENST00000553529 ZNF232Q9UNY5 417 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 IFT52Q9Y366 437 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 USF3Q68DE3 2245 aa16■□□□□ 0.15
SHMT2-206ENST00000553529 TMEM247A6NEH6 219 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 M0R1B8 84 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 DNPH1O43598 174 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 UPK3AO75631 287 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 CD8AP01732 235 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 INHBBP09529 407 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 ETS2P15036 469 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 CRYBA2P53672 197 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 LTBQ06643 244 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 TIMM23BQ5SRD1 257 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 AAED1Q7RTV5 226 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 PIAS4Q8N2W9 510 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-206ENST00000553529 POM121Q96HA1 1249 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 C18orf12Q96KH6 178 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 CGREF1Q99674 301 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 RAD21L1Q9H4I0 556 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 ESRP2Q9H6T0 727 aaKnown RBP15.99■□□□□ 0.15
SHMT2-206ENST00000553529 SEC61A2Q9H9S3 476 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 TAS2R16Q9NYV7 291 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 B3GAT1Q9P2W7 334 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 LEF1Q9UJU2 399 aaPredicted RBP15.99■□□□□ 0.15
SHMT2-206ENST00000553529 SLC9A8Q9Y2E8 581 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 CADP27708 2225 aa15.99■□□□□ 0.15
SHMT2-206ENST00000553529 NF1P21359 2839 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 GPR171O14626 319 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 EIF1BO60739 113 aaKnown RBP15.98■□□□□ 0.15
SHMT2-206ENST00000553529 MFN2O95140 757 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 LY6G6DO95868 133 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 LGI1O95970 557 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 HPRP00739 348 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 THY1P04216 161 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 PRKAR1BP31321 381 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 CDH11P55287 796 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 GUCY1A3Q02108 690 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 PRAMEF8Q5VWM4 474 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 PRAMEF7Q5VXH5 474 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 SHEQ5VZ18 495 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 DHRS4L2Q6PKH6 230 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 CREB3L2Q70SY1 520 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 LRRC75A-AS1Q8N1F1 130 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 RNF217Q8TC41 542 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 SMAP2Q8WU79 429 aaPredicted RBP15.98■□□□□ 0.15
SHMT2-206ENST00000553529 TMEM171Q8WVE6 324 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 FBXW5Q969U6 566 aa15.98■□□□□ 0.15
SHMT2-206ENST00000553529 GTPBP3Q969Y2 492 aaKnown RBP15.98■□□□□ 0.15
SHMT2-206ENST00000553529 ZNF837Q96EG3 531 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms