RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 C18orf12Q96KH6 178 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF607Q96SK3 696 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 C12orf10Q9HB07 376 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 NPHS2Q9NP85 383 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 ADPRHL2Q9NX46 363 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 RPS6KB2Q9UBS0 482 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 LEF1Q9UJU2 399 aaPredicted RBP11.42□□□□□ -0.58
ACTN1-207ENST00000553290 DCTN4Q9UJW0 460 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 NDUFAF1Q9Y375 327 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 NF1P21359 2839 aa11.42□□□□□ -0.58
ACTN1-207ENST00000553290 PRORSD1PA6NEY8 169 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ELOA3DA6NLF2 546 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-207ENST00000553290 PDLIM1O00151 329 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ANGPT2O15123 496 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 SERPINB7O75635 380 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 AHSA1O95433 338 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ITGA5P08648 1049 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 PTH2RP49190 550 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 HOXC5Q00444 222 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 TGFBR3Q03167 851 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 GABRA6Q16445 453 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ELOA3BQ3SY89 546 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF672Q499Z4 452 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-207ENST00000553290 RUNDC3AQ59EK9 446 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 C1QTNF12Q5T7M4 302 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 METTL21CQ5VZV1 264 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 C5orf46Q6UWT4 87 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 C6orf89Q6UWU4 347 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 YTHDF3Q7Z739 585 aaKnown RBP11.41□□□□□ -0.58
ACTN1-207ENST00000553290 GPAT4Q86UL3 456 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 C10orf111Q8N326 155 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 DPP10Q8N608 796 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 LSMEM1Q8N8F7 131 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ZIC4Q8N9L1 334 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 POMGNT2Q8NAT1 580 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 HIPK4Q8NE63 616 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ELOA3Q8NG57 546 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 OR9K2Q8NGE7 335 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 MFSD8Q8NHS3 518 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 DNAJA4Q8WW22 397 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-207ENST00000553290 MUS81Q96NY9 551 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 CPPED1Q9BRF8 314 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-207ENST00000553290 BDH2Q9BUT1 245 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 IKZF5Q9H5V7 419 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF385DQ9H6B1 395 aa11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF701Q9NV72 531 aaPredicted RBP11.41□□□□□ -0.58
ACTN1-207ENST00000553290 NIPBLQ6KC79 2804 aaeCLIP11.41□□□□□ -0.58
ACTN1-207ENST00000553290 ZFHX3Q15911 3703 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 A0A0G2JND7 137 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 SASH3O75995 380 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 INHBBP09529 407 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 RPS4XP62701 263 aaKnown RBP11.4□□□□□ -0.58
ACTN1-207ENST00000553290 RBBP4Q09028 425 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 ADRM1Q16186 407 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 TSPO2Q5TGU0 170 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 KLHL17Q6TDP4 642 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 TMEM108Q6UXF1 575 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 AAED1Q7RTV5 226 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 ABHD12BQ7Z5M8 362 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-207ENST00000553290 DHDDSQ86SQ9 333 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 C17orf78Q8N4C9 275 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 C1orf162Q8NEQ5 155 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-207ENST00000553290 KBTBD8Q8NFY9 601 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 OR52E4Q8NGH9 312 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 OR52N5Q8NH56 324 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 SMAP2Q8WU79 429 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-207ENST00000553290 RADILQ96JH8 1075 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 Q96MF0 132 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 ZNF385AQ96PM9 386 aaKnown RBP11.4□□□□□ -0.58
ACTN1-207ENST00000553290 CGREF1Q99674 301 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 TRIM2Q9C040 744 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 AMBRA1Q9C0C7 1298 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 SLCO5A1Q9H2Y9 848 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 GSX1Q9H4S2 264 aaPredicted RBP11.4□□□□□ -0.58
ACTN1-207ENST00000553290 EVA1AQ9H8M9 152 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 SLC7A10Q9NS82 523 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 SLC13A4Q9UKG4 626 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 MGAT4BQ9UQ53 548 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 LAMP3Q9UQV4 416 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 ANGPT4Q9Y264 503 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 RASD1Q9Y272 281 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 SLC25A15Q9Y619 301 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 CADP27708 2225 aa11.4□□□□□ -0.58
ACTN1-207ENST00000553290 OR6C65A6NJZ3 312 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 FAM171A2A8MVW0 826 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 FTCDNL1E5RQL4 147 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 OR2T1O43869 369 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 TPST1O60507 370 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 DANCRP0C864 163 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 PNMTP11086 282 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 PTAFRP25105 342 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 GTF2E2P29084 291 aaKnown RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 MPGP29372 298 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 RPS5P46782 204 aaKnown RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 P2RY4P51582 365 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 FOXG1P55316 489 aaPredicted RBP11.39□□□□□ -0.59
ACTN1-207ENST00000553290 ATP5J2P56134 94 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 NCALDP61601 193 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 EGR4Q05215 589 aa11.39□□□□□ -0.59
ACTN1-207ENST00000553290 FAM91A1Q658Y4 838 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms