RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 ART3Q13508 389 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 PNOCQ13519 176 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 CEBPEQ15744 281 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 CLPPQ16740 277 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 SLC25A52Q3SY17 297 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 ARMC12Q5T9G4 340 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 MARC1Q5VT66 337 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 C1orf189Q5VU69 101 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 MLIPQ5VWP3 458 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 LINC00696Q6ZRV3 163 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 Q6ZS92 163 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 NUFIP2Q7Z417 695 aaKnown RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 KRTAP11-1Q8IUC1 163 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 TMEM126BQ8IUX1 230 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 C11orf42Q8N5U0 333 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 SMYD1Q8NB12 490 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 SIDT2Q8NBJ9 832 aaKnown RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 OR6T1Q8NGN1 323 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 JOSD2Q8TAC2 188 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 NT5C3BQ969T7 300 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 DTD2Q96FN9 168 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 INTS14Q96SY0 518 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 BAG1Q99933 345 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 CCM2Q9BSQ5 444 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 VIPAS39Q9H9C1 493 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 MAGEF1Q9HAY2 307 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 AGPAT4Q9NRZ5 378 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 GPATCH2LQ9NWQ4 482 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 ARMCX3Q9UH62 379 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF256Q9Y2P7 627 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-217ENST00000553287 FBXO7Q9Y3I1 522 aa3.44□□□□□ -1.86
ATXN3-217ENST00000553287 COL6A5A8TX70 2615 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 A0A1B0GUH1 482 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 OR5H15A6NDH6 313 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 HMGB1P1B2RPK0 211 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-217ENST00000553287 H7C0S8 307 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 DFFAO00273 331 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 MED7O43513 233 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 MTX2O75431 263 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 LYNP07948 512 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 TDGF1P3P51864 188 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 UBE2IP63279 158 aaKnown RBP3.43□□□□□ -1.86
ATXN3-217ENST00000553287 FOLH1Q04609 750 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 BCL2L1Q07817 233 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 IHHQ14623 411 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 CAMK4Q16566 473 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 TIMM50Q3ZCQ8 353 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 CCDC14Q49A88 953 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 CCDC40Q4G0X9 1142 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 SLC22A6Q4U2R8 563 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 SHISA6Q6ZSJ9 500 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 TMEM26Q6ZUK4 368 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 TGIF2LYQ8IUE0 185 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 HSCBQ8IWL3 235 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 ZADH2Q8N4Q0 377 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF781Q8N8C0 355 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 C8orf46Q8TAG6 207 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 GPR148Q8TDV2 347 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 RXFP2Q8WXD0 754 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 AP2M1Q96CW1 435 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 TBC1D31Q96DN5 1066 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF514Q96K75 400 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-217ENST00000553287 TRIM62Q9BVG3 475 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 RIOK2Q9BVS4 552 aaKnown RBP3.43□□□□□ -1.86
ATXN3-217ENST00000553287 SLC39A8Q9C0K1 460 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 PDFQ9HBH1 243 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 MCCC2Q9HCC0 563 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 STAP1Q9ULZ2 295 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 PSMD13Q9UNM6 376 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 RPH3AQ9Y2J0 694 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-217ENST00000553287 SLC6A5Q9Y345 797 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 TMED7Q9Y3B3 224 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 KLF2Q9Y5W3 355 aaPredicted RBP3.43□□□□□ -1.86
ATXN3-217ENST00000553287 SPTBP11277 2137 aa3.43□□□□□ -1.86
ATXN3-217ENST00000553287 POLEQ07864 2286 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ZANQ9Y493 2812 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 RTTNQ86VV8 2226 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 CCDC162PA2VCL2 907 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 NKX2-6A6NCS4 301 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 PDZK1P1A8MUH7 402 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 TMCO5BA8MYB1 307 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 HCRTR1O43613 425 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ZNF253O75346 499 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 PALMO75781 387 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 KLF7O75840 302 aaPredicted RBP3.42□□□□□ -1.86
ATXN3-217ENST00000553287 KBTBD11O94819 623 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 YEATS4O95619 227 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 LY6G6DO95868 133 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 SLC4A1P02730 911 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 MT-ND3P03897 115 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 RLN1P04808 185 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 UMPSP11172 480 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 PVRP15151 417 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 CD1EP15812 388 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ACKR3P25106 362 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 RORAP35398 523 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 SYKP43405 635 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 CAPZBP47756 277 aa3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ADARP55265 1226 aaKnown RBP3.42□□□□□ -1.86
ATXN3-217ENST00000553287 ENPEPQ07075 957 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms