RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 ANKDD1AQ495B1 522 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 ACER2Q5QJU3 275 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 RNLSQ5VYX0 342 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 C9orf43Q8TAL5 461 aaPredicted RBP17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 STK35Q8TDR2 534 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 OR11A1Q9GZK7 315 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 MED20Q9H944 212 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 DIMT1Q9UNQ2 313 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 RIIAD1A6NNX1 92 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 RPL4P36578 427 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 NOVA1P51513 510 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 CRMP1Q14194 572 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 KLHL22Q53GT1 634 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 FAM69AQ5T7M9 428 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 C1orf140Q5VVS0 124 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 SLC22A10Q63ZE4 541 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 NIPAL3Q6P499 406 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 ADAMTS14Q8WXS8 1223 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 FUNDC2Q9BWH2 189 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 SLC24A3Q9HC58 644 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 WARS2Q9UGM6 360 aaKnown RBP17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 CLEC2DQ9UHP7 191 aa17.7■□□□□ 0.42
RBFOX1-215ENST00000553186 MT-ATP6P00846 226 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 HIST1H1CP16403 213 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 ZNF41P51814 821 aaPredicted RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 DBPQ10586 325 aaPredicted RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 DOC2BQ14184 412 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 MDGA2Q7Z553 956 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 C12orf43Q96C57 262 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 DNAJA3Q96EY1 480 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 CRELD1Q96HD1 420 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 MRGPRX4Q96LA9 322 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 SGCZQ96LD1 299 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 KATNB1Q9BVA0 655 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 FGF20Q9NP95 211 aaPredicted RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 M0R082 166 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 EFNA2O43921 213 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 TRMUO75648 421 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 APOL3O95236 402 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 ZNF3P17036 446 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 GSTT1P30711 240 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 TMBIM6P55061 237 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 RPL18Q07020 188 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 TGIF1Q15583 401 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 DCAF10Q5QP82 559 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 GID4Q8IVV7 300 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 CYB561A3Q8NBI2 242 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 SLC37A3Q8NCC5 494 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 POC1BQ8TC44 478 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 YIPF6Q96EC8 236 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 C1GALT1C1Q96EU7 318 aa17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 THOC3Q96J01 351 aaKnown RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 H2AFY2Q9P0M6 372 aaPredicted RBP17.69■□□□□ 0.42
RBFOX1-215ENST00000553186 ANKRD33BA6NCL7 494 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 SHISA8B8ZZ34 492 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 PRR23D1E9PI22 279 aaPredicted RBP17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 H3BMQ9 156 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 RAB36O95755 333 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 PRR23D2P0DMB1 279 aaPredicted RBP17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 ERVK-25P63136 954 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 ALG10Q5BKT4 473 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 B3GNT6Q6ZMB0 384 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 SLC16A12Q6ZSM3 486 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 FAM122BQ7Z309 247 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 NANOGNBQ7Z5D8 188 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 PLCZ1Q86YW0 608 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 OR52E2Q8NGJ4 325 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 OR4K13Q8NH42 304 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 OTULINQ96BN8 352 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 COG8Q96MW5 612 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 OR5M11Q96RB7 305 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 ANKRD10Q9NXR5 420 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 SEC14L4Q9UDX3 406 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 CELSR3Q9NYQ7 3312 aa17.68■□□□□ 0.42
RBFOX1-215ENST00000553186 ZNF208O43345 1280 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 IDH3BO43837 385 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 IFNGP01579 166 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 CD14P08571 375 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 SLC2A5P22732 501 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 PCSK6P29122 969 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 JMJD6Q6NYC1 403 aaPredicted RBP17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 IGF2-ASQ6U949 168 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 MEPCEQ7L2J0 689 aaKnown RBP17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 TMPRSS7Q7RTY8 843 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 GALNT15Q8N3T1 639 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 OR4K17Q8NGC6 315 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 KISS1RQ969F8 398 aaPredicted RBP17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 DDOQ99489 341 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 GPN2Q9H9Y4 310 aaPredicted RBP17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 KLHL1Q9NR64 748 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 TAS2R5Q9NYW4 299 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 LSM2Q9Y333 95 aaKnown RBP17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 IRGMA1A4Y4 181 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 FTCDNL1E5RQL4 147 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 HIST1H2ABP04908 130 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 APEHP13798 732 aaKnown RBP17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 IL11P20809 199 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 LIPAP38571 399 aa17.67■□□□□ 0.42
RBFOX1-215ENST00000553186 MAP2K6P52564 334 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms