RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 RHCEP18577 417 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 FPR1P21462 350 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 SSTR2P30874 369 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 CD79BP40259 229 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 RNF144AP50876 292 aaPredicted RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 CDH12P55289 794 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 TRIM25Q14258 630 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 TRAM2Q15035 370 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 POU4F3Q15319 338 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 OTUD3Q5T2D3 398 aaPredicted RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 SP5Q6BEB4 398 aaPredicted RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 SEM1Q6ZVN7 128 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 HMGN2P46Q86SG4 172 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 P2RY8Q86VZ1 359 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 DHFR2Q86XF0 187 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 GCNT2Q8N0V5 402 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 POMGNT2Q8NAT1 580 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 RBM15BQ8NDT2 890 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 ANKK1Q8NFD2 765 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 STEAP2Q8NFT2 490 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 STARD4Q96DR4 205 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 SLC41A3Q96GZ6 507 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 DACH2Q96NX9 599 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 ENKD1Q9H0I2 346 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 COQ10BQ9H8M1 238 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 FKRPQ9H9S5 495 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 ZNF226Q9NYT6 803 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 CD300AQ9UGN4 299 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 RIMS3Q9UJD0 308 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 ZNF229Q9UJW7 825 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 TMEM5Q9Y2B1 443 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 GPR52Q9Y2T5 361 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 NOSIPQ9Y314 301 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 MED31Q9Y3C7 131 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 CHST2Q9Y4C5 530 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 NOX1Q9Y5S8 564 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 SPENQ96T58 3664 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 INTS1Q8N201 2190 aaKnown RBP9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 MED12Q93074 2177 aa9.17□□□□□ -0.94
TRAFD1-208ENST00000552890 CACNA1CQ13936 2221 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 RELNP78509 3460 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 A0A1W2PNR3 127 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 TUBAL3A6NHL2 446 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 C16orf97H3BN30 126 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 M0R3H8 397 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 FZD7O75084 574 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 GCM2O75603 506 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 TNFSF13O75888 250 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 AQP8O94778 261 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 UMPSP11172 480 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 POU2F1P14859 743 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 NQO1P15559 274 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 CCNA2P20248 432 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 AGTR1P30556 359 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 UQCRC1P31930 480 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 KIR2DL2P43627 348 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 KIR2DL3P43628 341 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 SLC25A3Q00325 362 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 PLAURQ03405 335 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 C1DQ13901 141 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 CEACAM7Q14002 265 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 GUSBP1Q15486 140 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 OR7A5Q15622 319 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 FAM98BQ52LJ0 330 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 ABLIM2Q6H8Q1 611 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 OR7E24Q6IFN5 339 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 DEF8Q6ZN54 512 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 Q6ZT83 130 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 OFCC1Q8IZS5 231 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 RPRMLQ8N4K4 120 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 C10orf53Q8N6V4 93 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 GPR32P1Q8NGA4 272 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 VANGL1Q8TAA9 524 aaPredicted RBP9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 TMEM45BQ96B21 275 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 APH1AQ96BI3 265 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 ASB9Q96DX5 294 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 PYURFQ96I23 114 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 OXGR1Q96P68 337 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 BTBD10Q9BSF8 475 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 TRIM8Q9BZR9 551 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 MAGIXQ9H6Y5 334 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 NANSQ9NR45 359 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 MRPL39Q9NYK5 338 aaKnown RBP9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 SLC7A7Q9UM01 511 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 RCE1Q9Y256 329 aa9.16□□□□□ -0.94
TRAFD1-208ENST00000552890 HECTD1Q9ULT8 2610 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 A0A1W2PRQ8 180 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 CPSF4LA6NMK7 179 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 H0YC42 278 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 EBAG9O00559 213 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 SMAD9O15198 467 aaKnown RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ZNHIT1O43257 154 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 FRS3O43559 492 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 MGRN1O60291 552 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 ADAM11O75078 769 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 DNAJC8O75937 253 aaPredicted RBP9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 KRT33AO76009 404 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 MT-ND1P03886 318 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 OPN1LWP04000 364 aa9.15□□□□□ -0.94
TRAFD1-208ENST00000552890 PSMB1P20618 241 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms