RNA–Protein interactions for RNA: ENST00000550352.1

GNPTAB-207, Transcript of N-acetylglucosamine-1-phosphate transferase subunits alpha and beta, humanhuman

TSL 3

Gene GNPTAB, Length 787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNPTAB-207ENST00000550352 PIRO00625 290 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 CASKO14936 926 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 CHADO15335 359 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 ZNF254O75437 659 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 APBB3O95704 486 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 OR4Q2P0C623 313 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 GSTT2P0CG29 244 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 GSTT2BP0CG30 244 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 CXCL8P10145 99 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 CPN1P15169 458 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 PSMB1P20618 241 aaKnown RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 CCNE1P24864 410 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 UGT1A3P35503 534 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 LONP1P36776 959 aaKnown RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 TNFSF9P41273 254 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 CXCL12P48061 93 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 ACOT2P49753 483 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 RIPPLY3P57055 190 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 GTF2BQ00403 316 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 DPYSQ14117 519 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 KCNJ11Q14654 390 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 KARSQ15046 597 aaKnown RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 LDLRAP1Q5SW96 308 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 RAB12Q6IQ22 244 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 ZNF720Q7Z2F6 126 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 VPS36Q86VN1 386 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 KDM8Q8N371 416 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 BPIFB2Q8N4F0 458 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 C14orf178Q8N769 122 aaPredicted RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 MINDY2Q8NBR6 621 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 OR2L5Q8NG80 312 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 OR56B1Q8NGI3 324 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 C2orf15Q8WU43 125 aaKnown RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 FCGR1BQ92637 280 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 C16orf74Q96GX8 76 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 MSANTD3Q96H12 275 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 SENP8Q96LD8 212 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 TECTBQ96PL2 329 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 SPXQ9BT56 116 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 TBC1D10AQ9BXI6 508 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 CCSER1Q9C0I3 900 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 ASB7Q9H672 318 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 C8orf33Q9H7E9 229 aaPredicted RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 ISG20L2Q9H9L3 353 aaKnown RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 PNO1Q9NRX1 252 aaKnown RBP3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 ADAM22Q9P0K1 906 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 RAB23Q9ULC3 237 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 UBE4BO95155 1302 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 LOXHD1Q8IVV2 1947 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 MYO10Q9HD67 2058 aa3.32□□□□□ -1.88
GNPTAB-207ENST00000550352 LRRK1Q38SD2 2015 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 KIAA1671Q9BY89 1806 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 MYBPHLA2RUH7 354 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 RNF222A6NCQ9 220 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 SAGE2PA6NJ88 616 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 ZSCAN5BA6NJL1 495 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 ANKRD63C9JTQ0 380 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 E9PLD3 99 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 WWP2O00308 870 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 OR7A17O14581 309 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 FAM189A1O60320 539 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 TGFAP01135 160 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 IGHV3-23P01764 117 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 ANXA4P09525 319 aaPredicted RBP3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 GABRR2P28476 465 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 NMT1P30419 496 aaKnown RBP3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 RPL4P36578 427 aaKnown RBP3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 EMDP50402 254 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 RPL32P62910 135 aaKnown RBP3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 TFAMQ00059 246 aaKnown RBP3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 SMARCB1Q12824 385 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 C2orf83Q53S99 150 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 WSCD1Q658N2 575 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 STAC2Q6ZMT1 411 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 CCDC73Q6ZRK6 1079 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 RALGPS2Q86X27 583 aaPredicted RBP3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 SPPL2BQ8TCT7 592 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 PSMG2Q969U7 264 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 ELMO2Q96JJ3 720 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 Q9H3A6 140 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 GPN2Q9H9Y4 310 aaPredicted RBP3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 C1orf123Q9NWV4 160 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 CACNA1HO95180 2353 aa3.31□□□□□ -1.88
GNPTAB-207ENST00000550352 DMXL1Q9Y485 3027 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 VPS37CA5D8V6 355 aaPredicted RBP3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 FAM231BA6NCW3 169 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 SPECC1L-ADORA2AF8WAN1 911 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 PDXKO00764 312 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 SSX5O60225 188 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 HUS1O60921 280 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 KRT6AP02538 564 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 KRT6BP04259 564 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 RETP07949 1114 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 TDGF1P13385 188 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 GAP43P17677 238 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 ADSSP30520 456 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 HOXA6P31267 233 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 KRT6CP48668 564 aa3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 RPL10AP62906 217 aaKnown RBP3.3□□□□□ -1.88
GNPTAB-207ENST00000550352 BCL2L1Q07817 233 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms