RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 HCFC1P51610 2035 aa8.57□□□□□ -1.04
RAB5B-205ENST00000549034 FASNP49327 2511 aaKnown RBP8.57□□□□□ -1.04
RAB5B-205ENST00000549034 RELNP78509 3460 aa8.57□□□□□ -1.04
RAB5B-205ENST00000549034 DOPEY2Q9Y3R5 2298 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 TRAV36DV7A0A075B6V5 113 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 EEF1E1-BLOC1S5C9J1V9 151 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 J3KTA2 159 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 SMAD9O15198 467 aaKnown RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 GSC2O15499 205 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 EEF1E1O43324 174 aaKnown RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 CHP2O43745 196 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 CYTIPO60759 359 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 NPIPB7O75200 414 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 TNFSF13O75888 250 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 DNAJC8O75937 253 aaPredicted RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 OR5F1O95221 314 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 LYPD3O95274 346 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 COL8A1P27658 744 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 GRNP28799 593 aaKnown RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 GTF2E2P29084 291 aaKnown RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 ST3GAL3Q11203 375 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 FXNQ16595 210 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 OTUD3Q5T2D3 398 aaPredicted RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 C5orf46Q6UWT4 87 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 NUFIP2Q7Z417 695 aaKnown RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 TSPYL5Q86VY4 417 aaPredicted RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 CYP4Z1Q86W10 505 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 DHFR2Q86XF0 187 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF610Q8N9Z0 462 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 RELL2Q8NC24 303 aaPredicted RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 RNF128Q8TEB7 428 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 MCUR1Q96AQ8 359 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 LRRC46Q96FV0 321 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 MPP4Q96JB8 637 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 LRGUKQ96M69 825 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF300Q96RE9 604 aaPredicted RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 EPYCQ99645 322 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 TMEM43Q9BTV4 400 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 POLR2J2Q9GZM3 115 aaKnown RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 POLR2J3Q9H1A7 115 aaKnown RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 C12orf49Q9H741 205 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 PLSCR4Q9NRQ2 329 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 C6orf203Q9P0P8 240 aaPredicted RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 ACTR3BQ9P1U1 418 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 KLHL9Q9P2J3 617 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 RHCGQ9UBD6 479 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 PROCRQ9UNN8 238 aa8.56□□□□□ -1.04
RAB5B-205ENST00000549034 KLF2Q9Y5W3 355 aaPredicted RBP8.56□□□□□ -1.04
RAB5B-205ENST00000549034 ICE1Q9Y2F5 2266 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 IGKV1D-42A0A075B6H8 117 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 A8MXE2 369 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF814B7Z6K7 855 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 C19orf84I3L1E1 186 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 hCG_2039718K7EN88 272 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 KPNA4O00629 521 aaPredicted RBP8.55□□□□□ -1.04
RAB5B-205ENST00000549034 DNPH1O43598 174 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 RAMP1O60894 148 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 SS18L1O75177 396 aaPredicted RBP8.55□□□□□ -1.04
RAB5B-205ENST00000549034 HIST1H2ABP04908 130 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 THRBP10828 461 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 UQCRC1P31930 480 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 H3F3AP84243 136 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 IL1RL1Q01638 556 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 LTBQ06643 244 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 FAM69AQ5T7M9 428 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 PAQR6Q6TCH4 344 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 WDR88Q6ZMY6 472 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 CCDC121Q6ZUS5 278 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 HIST3H2AQ7L7L0 130 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 GPAT4Q86UL3 456 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 KDM8Q8N371 416 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 FAM86B1Q8N7N1 296 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 PIGXQ8TBF5 258 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 TMEM255BQ8WV15 326 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 HIST1H2ACQ93077 130 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 PRRC1Q96M27 445 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 HS6ST2Q96MM7 605 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 SEPHS2Q99611 448 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 PSD2Q9BQI7 771 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 PRSS27Q9BQR3 290 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 PTDSS2Q9BVG9 487 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 RBM24Q9BX46 236 aaKnown RBP8.55□□□□□ -1.04
RAB5B-205ENST00000549034 CADM1Q9BY67 442 aaKnown RBP8.55□□□□□ -1.04
RAB5B-205ENST00000549034 OPN3Q9H1Y3 402 aaPredicted RBP8.55□□□□□ -1.04
RAB5B-205ENST00000549034 MUC13Q9H3R2 512 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 CHST11Q9NPF2 352 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 A4GNTQ9UNA3 340 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 ENPP4Q9Y6X5 453 aa8.55□□□□□ -1.04
RAB5B-205ENST00000549034 CACNA1CQ13936 2221 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 AQP7P3A6NL99 342 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 ZNF724A8MTY0 619 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 FTCDNL1E5RQL4 147 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 LRRN3E7EW58 273 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 EBAG9O00559 213 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 GPR171O14626 319 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 MSTNO14793 375 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 FFAR1O14842 300 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 DIRAS1O95057 198 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 CH25HO95992 272 aa8.54□□□□□ -1.04
RAB5B-205ENST00000549034 CGAP01215 116 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms