RNA–Protein interactions for RNA: ENST00000548860.5

CACNB3-209, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 4,029 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-209ENST00000548860 CPED1A4D0V7 1026 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 C17orf105B2RV13 164 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 SPDEFO95238 335 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 CXCL3P19876 107 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 HLA-DMAP28067 261 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 PEBP1P30086 187 aaKnown RBP13.06□□□□□ -0.32
CACNB3-209ENST00000548860 PCGF3Q3KNV8 242 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 OR10K2Q6IF99 312 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 MCATQ8IVS2 390 aaKnown RBP13.06□□□□□ -0.32
CACNB3-209ENST00000548860 HSD17B8Q92506 261 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 SENP5Q96HI0 755 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-209ENST00000548860 FAM60AQ9NP50 221 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-209ENST00000548860 EVA1BQ9NVM1 165 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 PRKAR1BP31321 381 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 SIRPAP78324 504 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 PITPNAQ00169 270 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 ZP2Q05996 745 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.06□□□□□ -0.32
CACNB3-209ENST00000548860 HBMQ6B0K9 141 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 KIRREL2Q6UWL6 708 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-209ENST00000548860 CCDC28AQ8IWP9 274 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 PTP4A1Q93096 173 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 LINC00615Q96LM1 132 aaPredicted RBP13.06□□□□□ -0.32
CACNB3-209ENST00000548860 TIMM29Q9BSF4 260 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 ADAM29Q9UKF5 820 aa13.06□□□□□ -0.32
CACNB3-209ENST00000548860 TRIM64BA6NI03 449 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 SERPINA3P01011 423 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 RNH1P13489 461 aaKnown RBP13.05□□□□□ -0.32
CACNB3-209ENST00000548860 NID1P14543 1247 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 ATF1P18846 271 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 AKR1D1P51857 326 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 DEFA5Q01523 94 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 ALG10Q5BKT4 473 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 PYHIN1Q6K0P9 492 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
CACNB3-209ENST00000548860 OR52B4Q8NGK2 314 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 OR52I2Q8NH67 350 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 KLHDC7BQ96G42 594 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 KDM4EB2RXH2 506 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-209ENST00000548860 TMEM150CB9EJG8 249 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 HCRTR1O43613 425 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 PRKXP51817 358 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 PSMD4P55036 377 aaKnown RBP13.05□□□□□ -0.32
CACNB3-209ENST00000548860 OLFML2AQ68BL7 652 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 ARHGAP11AQ6P4F7 1023 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 C16orf47Q6ZP98 133 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-209ENST00000548860 ZNF248Q8NDW4 579 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 NPRL2Q8WTW4 380 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 HYLS1Q96M11 299 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 LSM2Q9Y333 95 aaKnown RBP13.05□□□□□ -0.32
CACNB3-209ENST00000548860 RFPL3O75679 317 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 STARP49675 285 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 NSDHLQ15738 373 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 Q5BKY6 102 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 TMEM91Q6ZNR0 172 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 KIAA0907Q7Z7F0 614 aaPredicted RBP13.05□□□□□ -0.32
CACNB3-209ENST00000548860 RCBTB1Q8NDN9 531 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 OR51D1Q8NGF3 324 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 WDR34Q96EX3 536 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 GPER1Q99527 375 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 KIR3DX1Q9H7L2 352 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 LIN7BQ9HAP6 207 aa13.05□□□□□ -0.32
CACNB3-209ENST00000548860 TRABD2BA6NFA1 517 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 RENP00797 406 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 MELKQ14680 651 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 AADACL4Q5VUY2 407 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 IL20Q9NYY1 176 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 MAFFQ9ULX9 164 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 SCN4AP35499 1836 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 RGS11O94810 467 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 PLATP00750 562 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 LIMS1P48059 325 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 FXYD6P3P58550 94 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 TRA2BP62995 288 aaKnown RBP13.04□□□□□ -0.32
CACNB3-209ENST00000548860 SPOCK1Q08629 439 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 DGAT2L6Q6ZPD8 337 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 RFPL4BQ6ZWI9 263 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 CD163Q86VB7 1156 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 PLPP7Q8NBV4 271 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 TMEM106AQ96A25 262 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 ZNF775Q96BV0 537 aaPredicted RBP13.04□□□□□ -0.32
CACNB3-209ENST00000548860 TEX101Q9BY14 249 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 FOLH1BQ9HBA9 442 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 BCL2L10Q9HD36 194 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 KLHL9Q9P2J3 617 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 CNOT1A5YKK6 2376 aaKnown RBP13.04□□□□□ -0.32
CACNB3-209ENST00000548860 GZMKP49863 264 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 NFATC4Q14934 902 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 SHHQ15465 462 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 ALG11Q2TAA5 492 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 ARMC10Q8N2F6 343 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 MS4A15Q8N5U1 240 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 OR5AK2Q8NH90 309 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 SFXN5Q8TD22 340 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 COX14Q96I36 57 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 SEC22AQ96IW7 307 aa13.04□□□□□ -0.32
CACNB3-209ENST00000548860 ALG12Q9BV10 488 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms