RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 NKX2-6A6NCS4 301 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 EFCAB10A6NFE3 127 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 ZNF99A8MXY4 864 aaPredicted RBP18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 ZNHIT1O43257 154 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 CHP2O43745 196 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 TOXO94900 526 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 SOX14O95416 240 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 GKN3PP0CG01 181 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 ACVR2AP27037 513 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 RBM34P42696 430 aaKnown RBP18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 TMBIM6P55061 237 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 EFNB1P98172 346 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 PRKCDQ05655 676 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 MYBPHQ13203 477 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 KLHL26Q53HC5 615 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 MEDAGQ5VYS4 303 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 Q71RC1 249 aaPredicted RBP18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 CLVS1Q8IUQ0 354 aaPredicted RBP18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 ZNF527Q8NB42 609 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 MDS2Q8NDY4 140 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 FAM71CQ8NEG0 241 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 TEX47Q8TBZ9 253 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 GGHQ92820 318 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 OSTF1Q92882 214 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 COPS4Q9BT78 406 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 PRRG3Q9BZD7 231 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 OR8D2Q9GZM6 311 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 KCNJ16Q9NPI9 418 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 IL20Q9NYY1 176 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 COPS7AQ9UBW8 275 aa18.08■□□□□ 0.49
CTDSP2-204ENST00000548823 TRIM64BA6NI03 449 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 A8MUA0 341 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 MT-ND2P03891 347 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 CDK1P06493 297 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 CHRNB4P30926 498 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 SLC15A1P46059 708 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 CTBP2P56545 445 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 LSM11P83369 360 aaKnown RBP eCLIP18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 HSF1Q00613 529 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 PIGFQ07326 219 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 GINS1Q14691 196 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 EBPQ15125 230 aaKnown RBP18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 SYT6Q5T7P8 510 aaPredicted RBP18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 FNDC7Q5VTL7 733 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 PRIMA1Q86XR5 153 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 KIF18BQ86Y91 864 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 NRMQ8IXM6 262 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 TMEM255BQ8WV15 326 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 TMEM239Q8WW34 195 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 ISOC1Q96CN7 298 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 HSPBAP1Q96EW2 488 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 SCMH1Q96GD3 660 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 IMMP1LQ96LU5 166 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 BCL7BQ9BQE9 202 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 ZNF426Q9BUY5 554 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 CCDC90BQ9GZT6 254 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 NXF5Q9H1B4 397 aaKnown RBP18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 EXOSC3Q9NQT5 275 aaKnown RBP18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 KLHL1Q9NR64 748 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 EDARQ9UNE0 448 aa18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 PPIEQ9UNP9 301 aaKnown RBP18.07■□□□□ 0.48
CTDSP2-204ENST00000548823 C2orf92A0A1B0GVN3 265 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 KIAA1324LA8MWY0 1029 aaPredicted RBP18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 BCAS1O75363 584 aaPredicted RBP18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 NGFRP08138 427 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 IGFBP1P08833 259 aaPredicted RBP18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 TBXA2RP21731 343 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 DNASE1P24855 282 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 RFX3P48380 749 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 GPR143P51810 404 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 TBCEQ15813 527 aaPredicted RBP18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 UBE2UQ5VVX9 321 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 TMEM211Q6ICI0 200 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 SLC27A4Q6P1M0 643 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 LINC00114Q6XXX2 140 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 TMPRSS11FQ6ZWK6 438 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 AHSA2Q719I0 299 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 SLC29A4Q7RTT9 530 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 ERI1Q8IV48 349 aaKnown RBP18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 ZNF321PQ8N8H1 164 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 ZNF441Q8N8Z8 693 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 TMEM178AQ8NBL3 297 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 RORBQ92753 470 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 NMD3Q96D46 503 aaKnown RBP18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 FAM46AQ96IP4 442 aaKnown RBP18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 SIGLEC12Q96PQ1 595 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 SMR3AQ99954 134 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 HES7Q9BYE0 225 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 LIME1Q9H400 295 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 ACOT13Q9NPJ3 140 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 HEATR5AQ86XA9 2040 aa18.06■□□□□ 0.48
CTDSP2-204ENST00000548823 HTR3EA5X5Y0 456 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 FAM90A27PA6NNH2 459 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 TRMUO75648 421 aaKnown RBP18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 CSTAP01040 98 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 HEXBP07686 556 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 CD46P15529 392 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 ENDOUP21128 410 aaKnown RBP18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 MASP1P48740 699 aa18.05■□□□□ 0.48
CTDSP2-204ENST00000548823 PCYT1AP49585 367 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms