RNA–Protein interactions for RNA: ENST00000548032.6

SEC23A-204, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2 BASIC

Gene SEC23A, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-204ENST00000548032 PLAUP00749 431 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 GGT1P19440 569 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 GTF2E2P29084 291 aaKnown RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 MDH1P40925 334 aaKnown RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 RPS5P46782 204 aaKnown RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 PCBP3P57721 371 aaKnown RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 MAPRE2Q15555 327 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 RABL3Q5HYI8 236 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 ALG10BQ5I7T1 473 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 C9orf135Q5VTT2 229 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 REP15Q6BDI9 236 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 TMEM225Q6GV28 225 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 ZNF704Q6ZNC4 412 aaPredicted RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 SNX32Q86XE0 403 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 P3H2Q8IVL5 708 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 BHLHE22Q8NFJ8 381 aaPredicted RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 OR9K2Q8NGE7 335 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 STK35Q8TDR2 534 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 KTI12Q96EK9 354 aaPredicted RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 ALPK1Q96QP1 1244 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 TRIM2Q9C040 744 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 CXXC4Q9H2H0 198 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 TMEM27Q9HBJ8 222 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 MRGBPQ9NV56 204 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 PARPBPQ9NWS1 579 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 ASB6Q9NWX5 421 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 KLHL14Q9P2G3 628 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 UPB1Q9UBR1 384 aa12.8□□□□□ -0.36
SEC23A-204ENST00000548032 TESQ9UGI8 421 aaKnown RBP12.8□□□□□ -0.36
SEC23A-204ENST00000548032 M0R3H8 397 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 CLOCKO15516 846 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 NPIPB7O75200 414 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 CNOT4O95628 575 aaKnown RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 PNMTP11086 282 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 COX5AP20674 150 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 PTNP21246 168 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 PPA1Q15181 289 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 NANOGP8Q6NSW7 305 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 C6orf89Q6UWU4 347 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 AAED1Q7RTV5 226 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 NET1Q7Z628 596 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 RANBP3LQ86VV4 465 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 SLC30A8Q8IWU4 369 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 ZNF433Q8N7K0 673 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 LSMEM1Q8N8F7 131 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 DNAJA4Q8WW22 397 aaPredicted RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 LRRC58Q96CX6 371 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 MUCL1Q96DR8 90 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 ZNF385AQ96PM9 386 aaKnown RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 CCL19Q99731 98 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 SH3GL1Q99961 368 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 USB1Q9BQ65 265 aaKnown RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 WFDC6Q9BQY6 131 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 SF3B5Q9BWJ5 86 aaKnown RBP12.79□□□□□ -0.36
SEC23A-204ENST00000548032 NANOGQ9H9S0 305 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 NGBQ9NPG2 151 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 ARMCX1Q9P291 453 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 CAPN7Q9Y6W3 813 aa12.79□□□□□ -0.36
SEC23A-204ENST00000548032 NAV3Q8IVL0 2385 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 BBIP1A8MTZ0 92 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 CBLP22681 906 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 PCGF2P35227 344 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 EGR4Q05215 589 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 OR1Q1Q15612 314 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 VMACQ2NL98 169 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 TSPO2Q5TGU0 170 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 ULK3Q6PHR2 472 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 C20orf204Q6ZNR8 217 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 PATL1Q86TB9 770 aaKnown RBP12.78□□□□□ -0.36
SEC23A-204ENST00000548032 KDM8Q8N371 416 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 OR52N5Q8NH56 324 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 MFSD8Q8NHS3 518 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 VANGL1Q8TAA9 524 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-204ENST00000548032 SLC26A7Q8TE54 656 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 C10orf82Q8WW14 230 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 SLC47A1Q96FL8 570 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 MCHR1Q99705 422 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 ECSITQ9BQ95 431 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 PTDSS2Q9BVG9 487 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 ESRP2Q9H6T0 727 aaKnown RBP12.78□□□□□ -0.36
SEC23A-204ENST00000548032 C12orf10Q9HB07 376 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 SLC7A10Q9NS82 523 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 BEX4Q9NWD9 120 aaPredicted RBP12.78□□□□□ -0.36
SEC23A-204ENST00000548032 TAS2R16Q9NYV7 291 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 MALT1Q9UDY8 824 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 ACANP16112 2415 aa12.78□□□□□ -0.36
SEC23A-204ENST00000548032 PRRC2AP48634 2157 aaKnown RBP12.77□□□□□ -0.36
SEC23A-204ENST00000548032 IGKV1D-42A0A075B6H8 117 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 A0A1W2PR80 420 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 OR5H1A6NKK0 313 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 FXYD1O00168 92 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 ATP8B1O43520 1251 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 TPST2O60704 377 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 SMPD2O60906 423 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 KRT33AO76009 404 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 LGI1O95970 557 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 CD3EP07766 207 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 CD99P14209 185 aa12.77□□□□□ -0.37
SEC23A-204ENST00000548032 P2RY4P51582 365 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms