RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 CXCL2P19875 107 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 GBX2P52951 348 aaPredicted RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 C1orf61Q13536 156 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 MDC1Q14676 2089 aaKnown RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 LNX2Q8N448 690 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 B3GNT4Q9C0J1 378 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 CHST6Q9GZX3 395 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 EXO5Q9H790 373 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 ERVMER34-1Q9H9K5 563 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 TAS2R3Q9NYW6 316 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF230Q9UIE0 474 aaPredicted RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 STON1Q9Y6Q2 735 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 A0A0G2JPF8 293 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 C13orf42A0A1B0GVH6 325 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 ELOA3DA6NLF2 546 aaPredicted RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 HNRNPCL3B7ZW38 293 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 SGK494L7N484 410 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 KAT7O95251 611 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 TPOP07202 933 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 HNRNPCL4P0DMR1 293 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 IL9P15248 144 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 PXNP49023 591 aaPredicted RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 ELOA3BQ3SY89 546 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 MAMSTRQ6ZN01 415 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 IKBIPQ70UQ0 350 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 ERN2Q76MJ5 926 aaKnown RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 KDM8Q8N371 416 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 POGLUT1Q8NBL1 392 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 NAXEQ8NCW5 288 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 ELOA3Q8NG57 546 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 OR51D1Q8NGF3 324 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 OR6N2Q8NGY6 317 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 TMEM27Q9HBJ8 222 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 FGF20Q9NP95 211 aaPredicted RBP13.5□□□□□ -0.25
HOXC11-202ENST00000546378 ZMIZ1Q9ULJ6 1067 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 LIPT1Q9Y234 373 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 NUBP2Q9Y5Y2 271 aa13.5□□□□□ -0.25
HOXC11-202ENST00000546378 DCDC2BA2VCK2 349 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 METTL12A8MUP2 240 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 PYCARD-AS1I3L0S3 204 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 PEX14O75381 377 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 GLULP15104 373 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 VAMP1P23763 118 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 MAOBP27338 520 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 FGF9P31371 208 aaPredicted RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 ABHD17CQ6PCB6 329 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 LCTLQ6UWM7 567 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 IDO2Q6ZQW0 420 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF454Q8N9F8 522 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 OR51A4Q8NGJ6 313 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 ADAD1Q96M93 576 aaKnown RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 CCDC3Q9BQI4 270 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 HRASLSQ9HDD0 168 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 ELF5Q9UKW6 265 aaPredicted RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 OPN1LWP04000 364 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 CISD3P0C7P0 127 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 EPXP11678 715 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 HPGDP15428 266 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 CBR1P16152 277 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 CDK2P24941 298 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 MAT1AQ00266 395 aaKnown RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 MBOAT2Q6ZWT7 520 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 FCAMRQ8WWV6 532 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 SLC6A20Q9NP91 592 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 COL4A4P53420 1690 aaPredicted RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 MCIDASD6RGH6 385 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 HRKO00198 91 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 RD3LP0DJH9 198 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 PSMB1P20618 241 aaKnown RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 TEKQ02763 1124 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 GFOD2Q3B7J2 385 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 PLPP7Q8NBV4 271 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 OR56A1Q8NGH5 318 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 FAM83CQ9BQN1 747 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 ACTRT3Q9BYD9 372 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 PARP12Q9H0J9 701 aaKnown RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 TMEM168Q9H0V1 697 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 POLMQ9NP87 494 aaPredicted RBP13.49□□□□□ -0.25
HOXC11-202ENST00000546378 CD93Q9NPY3 652 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 OR2S2Q9NQN1 319 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 PCDHGA5Q9Y5G8 931 aa13.49□□□□□ -0.25
HOXC11-202ENST00000546378 UBE2QL1A1L167 161 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 KDM4EB2RXH2 506 aaPredicted RBP13.48□□□□□ -0.25
HOXC11-202ENST00000546378 CTNSO60931 367 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 PON3Q15166 354 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 DCAF12L2Q5VW00 463 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 LEG1Q6P5S2 330 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 LRRC56Q8IYG6 542 aaPredicted RBP13.48□□□□□ -0.25
HOXC11-202ENST00000546378 Q96M85 177 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 C1QTNF2Q9BXJ5 285 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 LMAN2LQ9H0V9 348 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 SRMSQ9H3Y6 488 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 GDE1Q9NZC3 331 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 KLHL42Q9P2K6 505 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 KIAA1671Q9BY89 1806 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 CREBL2O60519 120 aaPredicted RBP13.48□□□□□ -0.25
HOXC11-202ENST00000546378 DPM1O60762 260 aa13.48□□□□□ -0.25
HOXC11-202ENST00000546378 RPN2P04844 631 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms