RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SRMP19623 302 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 ZP1P60852 638 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 PITPNAQ00169 270 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 LGALSLQ3ZCW2 172 aaPredicted RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 SDE2Q6IQ49 451 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 FAAP20Q6NZ36 180 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 NPEPL1Q8NDH3 523 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 FAM131CQ96AQ9 280 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 CCDC3Q9BQI4 270 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 TRIM2Q9C040 744 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.49□□□□□ -0.091e-12■□□□□ 9.5
LDLR-204ENST00000545707 HEXA-AS1Q9H8Q6 139 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 NRIP3Q9NQ35 241 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 RPS6KB2Q9UBS0 482 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 KLK11Q9UBX7 282 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 ELF5Q9UKW6 265 aaPredicted RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 BAIAP2Q9UQB8 552 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 ALPK2Q86TB3 2170 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 SLC22A5O76082 557 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 AK1P00568 194 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 SPI1P17947 270 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 SELENOPP49908 381 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 CAMK2DQ13557 499 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 POU4F3Q15319 338 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 CDONQ4KMG0 1287 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 NPSR1Q6W5P4 371 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 FCRLAQ7L513 359 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 LUZP2Q86TE4 346 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 ZNF511Q8NB15 262 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 OR52I2Q8NH67 350 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 RPLP0P6Q8NHW5 317 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 PRUNE2Q8WUY3 3088 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 SGTBQ96EQ0 304 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 SPRTNQ9H040 489 aaPredicted RBP14.48□□□□□ -0.09
LDLR-204ENST00000545707 TSPAN10Q9H1Z9 355 aaPredicted RBP14.48□□□□□ -0.09
LDLR-204ENST00000545707 OR10A4Q9H209 315 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 ZCCHC4Q9H5U6 513 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 CPNE7Q9UBL6 633 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 LAMA1P25391 3075 aa14.48□□□□□ -0.09
LDLR-204ENST00000545707 A0A0A6YYC8 382 aaPredicted RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 I3L1I5 382 aaPredicted RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 ZNF81P51508 661 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 ARPC4P59998 168 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 RPS15P62841 145 aaKnown RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 MAT1AQ00266 395 aaKnown RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 ANGPT1Q15389 498 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 RPL22L1Q6P5R6 122 aaKnown RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 FAM199XQ6PEV8 388 aaPredicted RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 ULK3Q6PHR2 472 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 LINC00114Q6XXX2 140 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 Q6ZTK2 550 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 BTN2A1Q7KYR7 527 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 MOSPD2Q8NHP6 518 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 DNAJA3Q96EY1 480 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 C20orf85Q9H1P6 137 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 EIF3KQ9UBQ5 218 aaKnown RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 FBXL21Q9UKT6 434 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 CACNA1IQ9P0X4 2223 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 ZSCAN5BA6NJL1 495 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 C2orf74A8MZ97 194 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 BLOC1S5-TXNDC5H3BN57 136 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 RAF1P04049 648 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 SLC35E2P0CK97 266 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 TNFRSF4P43489 277 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 DIO1P49895 249 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 ACTA2P62736 377 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 ACTG2P63267 376 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 ZNF267Q14586 743 aaPredicted RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 ESCO2Q56NI9 601 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 SYS1Q8N2H4 156 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 LSMEM1Q8N8F7 131 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 OR14A16Q8NHC5 309 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 SMIM4Q8WVI0 70 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 RGP1Q92546 391 aaPredicted RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 RIT1Q92963 219 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 SLC25A38Q96DW6 304 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 LMF1Q96S06 567 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 GABRG3Q99928 467 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 CHIAQ9BZP6 476 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 MKKSQ9NPJ1 570 aaPredicted RBP14.47□□□□□ -0.09
LDLR-204ENST00000545707 DLL4Q9NR61 685 aa14.47□□□□□ -0.09
LDLR-204ENST00000545707 A0A1B0GTH9 108 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 CIB4A0PJX0 185 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 ZFPL1O95159 310 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 ST6GAL1P15907 406 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 DNASE1P24855 282 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 PBX2P40425 430 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 RBM34P42696 430 aaKnown RBP14.46□□□□□ -0.09
LDLR-204ENST00000545707 VEGFCP49767 419 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 BTG2P78543 158 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 ZNHIT3Q15649 155 aaPredicted RBP14.46□□□□□ -0.09
LDLR-204ENST00000545707 HACD4Q5VWC8 232 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 ZNF782Q6ZMW2 699 aaPredicted RBP14.46□□□□□ -0.09
LDLR-204ENST00000545707 ZNF784Q8NCA9 323 aaPredicted RBP14.46□□□□□ -0.09
LDLR-204ENST00000545707 OR11G2Q8NGC1 345 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 RSC1A1Q92681 617 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 MAP6Q96JE9 813 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 LMAN2LQ9H0V9 348 aa14.46□□□□□ -0.09
LDLR-204ENST00000545707 METTL17Q9H7H0 456 aaPredicted RBP14.46□□□□□ -0.09
LDLR-204ENST00000545707 B3GNT2Q9NY97 397 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms