RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PPM1LQ5SGD2 360 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 SLC8B1Q6J4K2 584 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 C11orf88Q6PI97 169 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 CLEC18BQ6UXF7 455 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 AMZ2Q86W34 360 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 IQCA1Q86XH1 822 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 PEX5LQ8IYB4 626 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 METTL13Q8N6R0 699 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 C20orf203Q8NBC4 194 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 LPCAT1Q8NF37 534 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 GDAP1Q8TB36 358 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 TCEAL4Q96EI5 215 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 TMEM80Q96HE8 168 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 GCOM2Q9BZD3 368 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-224ENST00000545688 FAM124BQ9H5Z6 455 aaPredicted RBP2.63□□□□□ -1.99
SNHG1-224ENST00000545688 PSTPIP2Q9H939 334 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 ZNF302Q9NR11 478 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 OR1A1Q9P1Q5 309 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 SPRR3Q9UBC9 169 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 MTRRQ9UBK8 725 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 COPS7AQ9UBW8 275 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 ADAM28Q9UKQ2 775 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 FZR1Q9UM11 496 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 PI4KAP42356 2102 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 EML5Q05BV3 1969 aa2.63□□□□□ -1.99
SNHG1-224ENST00000545688 TLN1Q9Y490 2541 aaKnown RBP2.63□□□□□ -1.99
SNHG1-224ENST00000545688 ITPR2Q14571 2701 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 ITPR3Q14573 2671 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 SHROOM3Q8TF72 1996 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 PCDH15Q96QU1 1955 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 A0A0J9YXY3 114 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 CCDC69A6NI79 296 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 CD55P08174 381 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 OR8U8P0C7N1 319 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 BCKDHBP21953 392 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 OR1G1P47890 313 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 EIF4EBP1Q13541 118 aaPredicted RBP2.62□□□□□ -1.99
SNHG1-224ENST00000545688 KARSQ15046 597 aaKnown RBP2.62□□□□□ -1.99
SNHG1-224ENST00000545688 PSMD5Q16401 504 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 UBE2SQ16763 222 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 LRRC36Q1X8D7 754 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 LIN9Q5TKA1 542 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 PRAMEF7Q5VXH5 474 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 TWF2Q6IBS0 349 aaKnown RBP2.62□□□□□ -1.99
SNHG1-224ENST00000545688 GPBP1Q86WP2 473 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 SUMF2Q8NBJ7 301 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 CNNM3Q8NE01 707 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 ZNF461Q8TAF7 563 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 URGCPQ8TCY9 931 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 ING5Q8WYH8 240 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 CCDC51Q96ER9 411 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 FUT8Q9BYC5 575 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 APMAPQ9HDC9 416 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 DUS2Q9NX74 493 aaKnown RBP2.62□□□□□ -1.99
SNHG1-224ENST00000545688 DDX19BQ9UMR2 479 aa2.62□□□□□ -1.99
SNHG1-224ENST00000545688 PIN4Q9Y237 131 aaKnown RBP2.62□□□□□ -1.99
SNHG1-224ENST00000545688 EXOSC1Q9Y3B2 195 aaKnown RBP2.62□□□□□ -1.99
SNHG1-224ENST00000545688 SF3B1O75533 1304 aaKnown RBP eCLIP2.62□□□□□ -1.992e-7■■■■□ 22.6
SNHG1-224ENST00000545688 NBASA2RRP1 2371 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 SPTBN1Q01082 2364 aaKnown RBP2.61□□□□□ -1.99
SNHG1-224ENST00000545688 POLQO75417 2590 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 NUP205Q92621 2012 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 IGHV7-81A0A0B4J1V7 117 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 SLC7A4O43246 635 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 NME2P1O60361 137 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 CCDC192P0DO97 292 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 AREGP15514 252 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 HTR1EP28566 365 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 ADORA2BP29275 332 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 MARCKSP29966 332 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-224ENST00000545688 RDXP35241 583 aaKnown RBP2.61□□□□□ -1.99
SNHG1-224ENST00000545688 UGT1A5P35504 534 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 PMELP40967 661 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 P2RY2P41231 377 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 ROR1Q01973 937 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 PON2Q15165 354 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 AANATQ16613 207 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 KRTAP21-3Q3LHN1 58 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 TEX44Q53QW1 395 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 BEND6Q5SZJ8 279 aaPredicted RBP2.61□□□□□ -1.99
SNHG1-224ENST00000545688 HECTD3Q5T447 861 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 CATSPER4Q7RTX7 472 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 YRDCQ86U90 279 aaKnown RBP2.61□□□□□ -1.99
SNHG1-224ENST00000545688 CCDC36Q8IYA8 594 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 LEMD2Q8NC56 503 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 OR2A12Q8NGT7 310 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 LZTS2Q9BRK4 669 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 CHRDL1Q9BU40 450 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 KRT23Q9C075 422 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 SLC5A7Q9GZV3 580 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 CXCL16Q9H2A7 254 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 VCXQ9H320 206 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 TMEM245Q9H330 911 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 DHX33Q9H6R0 707 aaKnown RBP2.61□□□□□ -1.99
SNHG1-224ENST00000545688 NANSQ9NR45 359 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 MMP26Q9NRE1 261 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 NRBP2Q9NSY0 501 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 SCML2Q9UQR0 700 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 HES2Q9Y543 173 aa2.61□□□□□ -1.99
SNHG1-224ENST00000545688 CDH10Q9Y6N8 788 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms