RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 SLC17A5Q9NRA2 495 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 FAM120CQ9NX05 1096 aaKnown RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 ELOVL2Q9NXB9 296 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 RABL2AQ9UBK7 228 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-222ENST00000545308 POLDIP2Q9Y2S7 368 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 DMDP11532 3685 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 SHROOM3Q8TF72 1996 aa3.25□□□□□ -1.89
SNHG1-222ENST00000545308 PLXNA4Q9HCM2 1894 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ADGRA3Q8IWK6 1321 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NRCAMQ92823 1304 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF532Q9HCE3 1301 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 FASNP49327 2511 aaKnown RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 IGHV3OR16-10A0A075B7F0 116 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 CTAGE15A4D2H0 777 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 LRP5LA4QPB2 252 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 OR6C65A6NJZ3 312 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NPIPA7E9PJI5 369 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 SGK1O00141 431 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 HAS3O00219 553 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NBR2O15453 112 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 MSH4O15457 936 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 TAPBPO15533 448 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ARHGEF9O43307 516 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 TRIM3O75382 744 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 MELTFP08582 738 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NPIPA8P0DM63 369 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 IDSP22304 550 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 CDH5P33151 784 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 HMGCLP35914 325 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 MAGEA8P43361 318 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 CCT3P49368 545 aaKnown RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ATP12AP54707 1039 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 SEC61GP60059 68 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NCBP1Q09161 790 aaKnown RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 BST1Q10588 318 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ST3GAL3Q11203 375 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF154Q13106 437 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 LAGE3Q14657 143 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 GANABQ14697 944 aaKnown RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 MRGPRG-AS1Q2M3A8 158 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 TP53I3Q53FA7 332 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 VWA2Q5GFL6 755 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 DCST2Q5T1A1 773 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ATL3Q6DD88 541 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 PVRIGQ6DKI7 326 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 OR4F3Q6IEY1 312 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF613Q6PF04 617 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 CCDC80Q76M96 950 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NLRP9Q7RTR0 991 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 TMCO2Q7Z6W1 182 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 CTAGE6Q86UF2 777 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 IFNEQ86WN2 208 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 OR2T33Q8NG76 320 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 OR9A4Q8NGU2 314 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 OR4Q3Q8NH05 313 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 ADAMTS16Q8TE57 1224 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 SDR42E1Q8WUS8 393 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 DYNLL2Q96FJ2 89 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 CCDC77Q9BR77 488 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 TM2D1Q9BX74 207 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 GPR61Q9BZJ8 451 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NXF5Q9H1B4 397 aaKnown RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 GLIPR2Q9H4G4 154 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 VPS37BQ9H9H4 285 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 AMBNQ9NP70 447 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 IL36GQ9NZH8 169 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 NPIPA1Q9UND3 350 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 MRPL11Q9Y3B7 192 aaKnown RBP3.24□□□□□ -1.89
SNHG1-222ENST00000545308 TIMM10BQ9Y5J6 103 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 CEP250Q9BV73 2442 aa3.24□□□□□ -1.89
SNHG1-222ENST00000545308 MYH9P35579 1960 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 DOCK8Q8NF50 2099 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 A0A0U1RQS6 177 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 FAM47DPA6NHR8 397 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SAGE2PA6NJ88 616 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 OR52A4PA6NMU1 304 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SNTNA6NMZ2 147 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF716A6NP11 495 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 H3BMQ9 156 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 TIMM8AO60220 97 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ERLIN1O75477 346 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 VENTXO95231 258 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 HPP00738 406 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SNRPCP09234 159 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ALOX5P09917 674 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 H2BFMP0C1H6 154 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ZNF735P0CB33 412 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 HSPD1P10809 573 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 DBTP11182 482 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 SFTPCP11686 197 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 POU2F1P14859 743 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 NCF2P19878 526 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 GNPDA1P46926 289 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 RPL23AP62750 156 aaKnown RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 IRX1P78414 480 aaPredicted RBP3.23□□□□□ -1.89
SNHG1-222ENST00000545308 RIPPLY1Q0D2K3 151 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 RAB40BQ12829 278 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 ABRAXAS2Q15018 415 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 LTB4RQ15722 352 aa3.23□□□□□ -1.89
SNHG1-222ENST00000545308 CYP51A1Q16850 503 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms