RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 POU3F1Q03052 451 aaPredicted RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 TUSC1Q2TAM9 212 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 SPDYE7PQ495Y7 208 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 SLC9B1Q4ZJI4 515 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 OTUD3Q5T2D3 398 aaPredicted RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 LIPMQ5VYY2 423 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 EMBQ6PCB8 327 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 PAQR6Q6TCH4 344 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 HMGN2P46Q86SG4 172 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 RIBC1Q8N443 379 aaPredicted RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 SIGLECL1Q8N7X8 197 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 FAM169BQ8N8A8 192 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 OR5AK3PQ8NH89 298 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 PSMA8Q8TAA3 256 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 MAGEE2Q8TD90 523 aaPredicted RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 OR5P2Q8WZ92 322 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 RDH5Q92781 318 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 TRIM44Q96DX7 344 aaPredicted RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 NAA11Q9BSU3 229 aaPredicted RBP8.06□□□□□ -1.12
CHD4-212ENST00000545083 ZNF350Q9GZX5 532 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 RAB17Q9H0T7 212 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 TUBB1Q9H4B7 451 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 GRPEL1Q9HAV7 217 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 NOX3Q9HBY0 568 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 REV1Q9UBZ9 1251 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 OPN4Q9UHM6 478 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 ATP6V1HQ9UI12 483 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 ZDHHC2Q9UIJ5 367 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 ZNF180Q9UJW8 692 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 OSGIN1Q9UJX0 560 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 TMED7Q9Y3B3 224 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 CMAHPQ9Y471 501 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 CORINQ9Y5Q5 1042 aa8.06□□□□□ -1.12
CHD4-212ENST00000545083 DNAJC9-AS1A6NH13 148 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 VSTM5A8MXK1 200 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 TMEM229AB2RXF0 380 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 G3V2L1 256 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 M0R233 179 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 AP3D1O14617 1153 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 SCAMP2O15127 329 aaKnown RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 DEAF1O75398 565 aaPredicted RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 KRT33AO76009 404 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 AKR7A3O95154 331 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 MPZL1O95297 269 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 KRT16P08779 473 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 SNRPAP09012 282 aaKnown RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 UROSP10746 265 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 BCKDHAP12694 445 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 PAX7P23759 505 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 IDH2P48735 452 aaKnown RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 TMEM33P57088 247 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 SLC7A5Q01650 507 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 ZP4Q12836 540 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 NPRL3Q12980 569 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 DAG1Q14118 895 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 MAD2L1BPQ15013 274 aaPredicted RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 AP1ARQ63HQ0 302 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 ACSM5Q6NUN0 579 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 FRMD7Q6ZUT3 714 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 ABHD12BQ7Z5M8 362 aaPredicted RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 LRP11Q86VZ4 500 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 CLEC4FQ8N1N0 589 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 TEX29Q8N6K0 151 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 NANPQ8TBE9 248 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 ZG16BQ96DA0 208 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 MTERF3Q96E29 417 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 SYT3Q9BQG1 590 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 SF3B5Q9BWJ5 86 aaKnown RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 KCNF1Q9H3M0 494 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 ZNF665Q9H7R5 613 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 SLC52A3Q9NQ40 469 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 MED29Q9NX70 200 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 MYEF2Q9P2K5 600 aaKnown RBP8.05□□□□□ -1.12
CHD4-212ENST00000545083 GIMAP2Q9UG22 337 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 EMCNQ9ULC0 261 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 PCDHGB4Q9UN71 923 aa8.05□□□□□ -1.12
CHD4-212ENST00000545083 ARHGAP32A7KAX9 2087 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 A0A0G2JMP0 313 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 A0A0X1KG70 313 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 LIPT2A6NK58 231 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 AQP7P3A6NL99 342 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 SLC28A1O00337 649 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 LSM1O15116 133 aaKnown RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 ZNF208O43345 1280 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 STX11O75558 287 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 GSNP06396 782 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 GSTA1P08263 222 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 NR4A1P22736 598 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 PRTN3P24158 256 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 FKBP2P26885 142 aaKnown RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 GCAP28676 217 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 TACR3P29371 465 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 EVX1P49640 407 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 P2RY4P51582 365 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 ARF1P84077 181 aaKnown RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 SRSF4Q08170 494 aaKnown RBP8.04□□□□□ -1.12
CHD4-212ENST00000545083 CEACAM7Q14002 265 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 OCLNQ16625 522 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 ARHGAP11BQ3KRB8 267 aa8.04□□□□□ -1.12
CHD4-212ENST00000545083 GALNTL6Q49A17 601 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms