RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MDS2Q8NDY4 140 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 ATP6V1C2Q8NEY4 427 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 HAS2Q92819 552 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 SLC25A36Q96CQ1 311 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 DNAJA3Q96EY1 480 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 DUSP21Q9H596 190 aa27.48■■□□□ 1.99
CCM2-219ENST00000544363 PAK1IP1Q9NWT1 392 aaPredicted RBP27.48■■□□□ 1.99
CCM2-219ENST00000544363 BOKQ9UMX3 212 aaPredicted RBP27.48■■□□□ 1.99
CCM2-219ENST00000544363 TRIM64CA6NLI5 447 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 MCIDASD6RGH6 385 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 ENTPD6O75354 484 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 SRD5A2P31213 254 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 UQCRC1P31930 480 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 AQP2P41181 271 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 FOXK2Q01167 660 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 SELENBP1Q13228 472 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 TMEM44Q2T9K0 475 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 MEDAGQ5VYS4 303 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 ZNF540Q8NDQ6 660 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 OR2M7Q8NG81 312 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 MOSPD2Q8NHP6 518 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 SGCDQ92629 289 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 ARL5BQ96KC2 179 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 ZFP64Q9NPA5 681 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 DNAJC27Q9NZQ0 273 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 RPH3AQ9Y2J0 694 aaPredicted RBP27.47■■□□□ 1.99
CCM2-219ENST00000544363 GPR52Q9Y2T5 361 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 DCHS1Q96JQ0 3298 aa27.47■■□□□ 1.99
CCM2-219ENST00000544363 PINLYPA6NC86 204 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 TFPIP10646 304 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 FKBP2P26885 142 aaKnown RBP27.46■■□□□ 1.99
CCM2-219ENST00000544363 RPL4P36578 427 aaKnown RBP27.46■■□□□ 1.99
CCM2-219ENST00000544363 NUDT6P53370 316 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 SLC35A2P78381 396 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 FOXO1Q12778 655 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 GLYR1Q49A26 553 aaPredicted RBP27.46■■□□□ 1.99
CCM2-219ENST00000544363 SYT14P1Q58G82 188 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 ZNF773Q6PK81 442 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 FDCSPQ8NFU4 85 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 MFSD8Q8NHS3 518 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 LRR1Q96L50 414 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 GPX7Q96SL4 187 aaPredicted RBP27.46■■□□□ 1.99
CCM2-219ENST00000544363 HES7Q9BYE0 225 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 AMBNQ9NP70 447 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 BATF3Q9NR55 127 aa27.46■■□□□ 1.99
CCM2-219ENST00000544363 FTCDNL1E5RQL4 147 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 H3BML4 177 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 PEPDP12955 493 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 SLC35F1Q5T1Q4 408 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 SLC6A19Q695T7 634 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 IGFN1Q86VF2 1251 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 OR5J2Q8NH18 312 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 SLC25A43Q8WUT9 341 aaPredicted RBP27.45■■□□□ 1.99
CCM2-219ENST00000544363 IPCEF1Q8WWN9 437 aaPredicted RBP27.45■■□□□ 1.99
CCM2-219ENST00000544363 CMC2Q9NRP2 79 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 PSORS1C1Q9UIG5 152 aa27.45■■□□□ 1.99
CCM2-219ENST00000544363 CNTRLQ7Z7A1 2325 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 SLC2A10O95528 541 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 SP1P08047 785 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 ZNF17P17021 662 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 GRPRP30550 384 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 MFSD13AQ14CX5 517 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 SLC25A25Q6KCM7 469 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 BCDIN3DQ7Z5W3 292 aaKnown RBP27.45■■□□□ 1.98
CCM2-219ENST00000544363 SULF2Q8IWU5 870 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 LRRC75AQ8NAA5 344 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 RELTQ969Z4 430 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 ERMAPQ96PL5 475 aaPredicted RBP27.45■■□□□ 1.98
CCM2-219ENST00000544363 UBL7Q96S82 380 aaPredicted RBP27.45■■□□□ 1.98
CCM2-219ENST00000544363 RHNO1Q9BSD3 238 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 NRIP3Q9NQ35 241 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 MRPS18CQ9Y3D5 142 aaKnown RBP27.45■■□□□ 1.98
CCM2-219ENST00000544363 KCNMB2Q9Y691 235 aa27.45■■□□□ 1.98
CCM2-219ENST00000544363 RFPL3SP0C7P2 107 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 IDUAP35475 653 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 ARG2P78540 354 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 RPL18Q07020 188 aaKnown RBP27.44■■□□□ 1.98
CCM2-219ENST00000544363 TOMM20Q15388 145 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 SGCBQ16585 318 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 ALG10Q5BKT4 473 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 RAET1LQ5VY80 246 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 ARHGAP11AQ6P4F7 1023 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 DTNBP1Q96EV8 351 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 ZNF582Q96NG8 517 aaPredicted RBP27.44■■□□□ 1.98
CCM2-219ENST00000544363 NDEL1Q9GZM8 345 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 KLHL1Q9NR64 748 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 KLF13Q9Y2Y9 288 aaPredicted RBP27.44■■□□□ 1.98
CCM2-219ENST00000544363 IER3IP1Q9Y5U9 82 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 SPTBN2O15020 2390 aa27.44■■□□□ 1.98
CCM2-219ENST00000544363 CLCA1A8K7I4 914 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 NME2P1O60361 137 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 TFAP2AP05549 437 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 HTR1AP08908 422 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 CD46P15529 392 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 NME2P22392 152 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 NOS3P29474 1203 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 CLK1P49759 484 aaKnown RBP27.43■■□□□ 1.98
CCM2-219ENST00000544363 PIGFQ07326 219 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 GGHQ92820 318 aa27.43■■□□□ 1.98
CCM2-219ENST00000544363 PIGQQ9BRB3 760 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms