RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 SLC35G6P0C7Q6 338 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 ST6GAL1P15907 406 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 MAKP20794 623 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 DNASE1P24855 282 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 HOXA1P49639 335 aaPredicted RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 ZNF136P52737 540 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 TNFRSF17Q02223 184 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 RELQ04864 619 aaPredicted RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 VASNQ6EMK4 673 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 RASSF6Q6ZTQ3 369 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 CPOQ8IVL8 374 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 SLC25A45Q8N413 288 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 AVL9Q8NBF6 648 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 PIGXQ8TBF5 258 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 AHCYL2Q96HN2 611 aaKnown RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 SMAD5Q99717 465 aaKnown RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 C1QTNF6Q9BXI9 259 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 IL21RQ9HBE5 538 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 GSTK1Q9Y2Q3 226 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 SIRT4Q9Y6E7 314 aaPredicted RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 KDM4EB2RXH2 506 aaPredicted RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 M0R233 179 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 FGF17O60258 216 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 CT62P0C5K7 136 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 ZNF3P17036 446 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 CXCL3P19876 107 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 TBXA2RP21731 343 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 HSD17B7P56937 341 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 PLAURQ03405 335 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 RAB40BQ12829 278 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 GRM7Q14831 915 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 ZNF124Q15973 351 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 NDUFA9Q16795 377 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 MINDY4Q4G0A6 757 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 C14orf28Q4W4Y0 310 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 SLC25A30Q5SVS4 291 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 AADACL4Q5VUY2 407 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 PLBD1Q6P4A8 553 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 ZNF620Q6ZNG0 422 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 DGAT2L6Q6ZPD8 337 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 OR51G2Q8NGK0 314 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 NT5CQ8TCD5 201 aa13.79□□□□□ -0.2
CHFR-223ENST00000544268 SPRYD4Q8WW59 207 aaPredicted RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 MS4A7Q9GZW8 240 aaPredicted RBP13.79□□□□□ -0.2
CHFR-223ENST00000544268 A8MXK9 166 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 H0YGG7 62 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 GMDSO60547 372 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 CLUP10909 449 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 GSTM3P21266 225 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 CAPZBP47756 277 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 ARF3P61204 181 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 ANKRD39Q53RE8 183 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 NHLRC3Q5JS37 347 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 HEPHL1Q6MZM0 1159 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 MRGPREQ86SM8 312 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 KLBQ86Z14 1044 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 TMEM105Q8N8V8 129 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 ACOT11Q8WXI4 607 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 GAL3ST3Q96A11 431 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 SDF2Q99470 211 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 ATF6BQ99941 703 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 PRSS27Q9BQR3 290 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 ARHGAP9Q9BRR9 750 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 TTTY10Q9BZA0 68 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 HDHD2Q9H0R4 259 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 SEMA6CQ9H3T2 930 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 SAV1Q9H4B6 383 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 UCK1Q9HA47 277 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 FAM60AQ9NP50 221 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 FBXL4Q9UKA2 621 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 CBLCQ9ULV8 474 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 CLCA2Q9UQC9 943 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 MRPS7Q9Y2R9 242 aaKnown RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 ASXL3Q9C0F0 2248 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 PCDH15Q96QU1 1955 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 MEIKINA0A087WXM9 373 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 GXYLT2A0PJZ3 443 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 LILRA5A6NI73 299 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 OR6C65A6NJZ3 312 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 SYT5O00445 386 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 KLF4O43474 513 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 GCGRP47871 477 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 CTBP2P56545 445 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 SHBQ15464 509 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 DEFB110Q30KQ9 67 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 MZT2AQ6P582 158 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 THSD4Q6ZMP0 1018 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 QSOX2Q6ZRP7 698 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 RNF44Q7L0R7 432 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 NR2C2APQ86WQ0 139 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 ATOH1Q92858 354 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 SENP5Q96HI0 755 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 MS4A4EQ96PG1 132 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 ERMAPQ96PL5 475 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 SLC38A2Q96QD8 506 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 NPAS1Q99742 590 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 ZNF436Q9C0F3 470 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 FGF20Q9NP95 211 aaPredicted RBP13.78□□□□□ -0.2
CHFR-223ENST00000544268 FSCN3Q9NQT6 498 aa13.78□□□□□ -0.2
CHFR-223ENST00000544268 PFDN2Q9UHV9 154 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms