RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 AAED1Q7RTV5 226 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 GPAT4Q86UL3 456 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 MUC15Q8N387 334 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 OR9K2Q8NGE7 335 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 OR52E4Q8NGH9 312 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 SLC38A5Q8WUX1 472 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 SLC35B4Q969S0 331 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 RHNO1Q9BSD3 238 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 MOV10Q9HCE1 1003 aaKnown RBP11.53□□□□□ -0.56
RTN3-213ENST00000543552 OBP2BQ9NPH6 170 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 SLC17A5Q9NRA2 495 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 SLC7A10Q9NS82 523 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 RLIMQ9NVW2 624 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 PLCE1Q9P212 2302 aa11.53□□□□□ -0.56
RTN3-213ENST00000543552 ZC3H12DA2A288 527 aaKnown RBP11.52□□□□□ -0.57
RTN3-213ENST00000543552 KLF11O14901 512 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 C1QCP02747 245 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 TFPTP0C1Z6 253 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 GKN3PP0CG01 181 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 GTF2E2P29084 291 aaKnown RBP11.52□□□□□ -0.57
RTN3-213ENST00000543552 FABP6P51161 128 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 MVDP53602 400 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 CHRNB3Q05901 458 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 FADDQ13158 208 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 RAB35Q15286 201 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 SLC9B1Q4ZJI4 515 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 TSPO2Q5TGU0 170 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 TMEM225Q6GV28 225 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 VRK2Q86Y07 508 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 TMEM19Q96HH6 336 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 ZNF317Q96PQ6 595 aaPredicted RBP11.52□□□□□ -0.57
RTN3-213ENST00000543552 SPATA9Q9BWV2 254 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 CACNG6Q9BXT2 260 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 B3GALT5Q9Y2C3 310 aa11.52□□□□□ -0.57
RTN3-213ENST00000543552 A0A1W2PR80 420 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 C5orf58C9J3I9 102 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 E7EQL1 145 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 ZNF587BE7ETH6 402 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 H7C417 338 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 SSX4O60224 188 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 CRLF1O75462 422 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 AKR7A3O95154 331 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 AHSA1O95433 338 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 CSF3P09919 207 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 NTF4P34130 210 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 ACAA2P42765 397 aaKnown RBP11.51□□□□□ -0.57
RTN3-213ENST00000543552 ZNF311Q5JNZ3 666 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 C9orf135Q5VTT2 229 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 C1orf140Q5VVS0 124 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 C11orf71Q6IPW1 123 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 DNM1P46Q6ZS02 220 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 PRIMA1Q86XR5 153 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 GOLGA6L1Q8N7Z2 621 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 TMEM99Q8N816 258 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 BBS10Q8TAM1 723 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 STK35Q8TDR2 534 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 ZBTB9Q96C00 473 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 KCNS3Q9BQ31 491 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 A4GALTQ9NPC4 353 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 SLC6A13Q9NSD5 602 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 TMEM45AQ9NWC5 275 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 ADPRHL2Q9NX46 363 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 GDF2Q9UK05 429 aaPredicted RBP11.51□□□□□ -0.57
RTN3-213ENST00000543552 RASD1Q9Y272 281 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 ATP23Q9Y6H3 246 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 PMF1-BGLAPU3KQ54 211 aa11.51□□□□□ -0.57
RTN3-213ENST00000543552 POLR3GO15318 223 aaPredicted RBP11.5□□□□□ -0.57
RTN3-213ENST00000543552 FRS3O43559 492 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 CD5LO43866 347 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 TGDSO95455 350 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 PPIBP23284 216 aaKnown RBP11.5□□□□□ -0.57
RTN3-213ENST00000543552 SH3BGRP55822 239 aaPredicted RBP11.5□□□□□ -0.57
RTN3-213ENST00000543552 UBE2NP61088 152 aaKnown RBP11.5□□□□□ -0.57
RTN3-213ENST00000543552 KRTAP1-1Q07627 177 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 SPOCK1Q08629 439 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 MAPK11Q15759 364 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 RPS26P11Q5JNZ5 115 aaPredicted RBP11.5□□□□□ -0.57
RTN3-213ENST00000543552 C5orf46Q6UWT4 87 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 KRT73Q86Y46 540 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 WDR31Q8NA23 367 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 MAPK1IP1LQ8NDC0 245 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 VPS33AQ96AX1 596 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 TLCD1Q96CP7 247 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 AURKBQ96GD4 344 aaPredicted RBP11.5□□□□□ -0.57
RTN3-213ENST00000543552 BOD1Q96IK1 185 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 OR52B2Q96RD2 323 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 BCL2L10Q9HD36 194 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 RPS6KB2Q9UBS0 482 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 SONP18583 2426 aaKnown RBP11.5□□□□□ -0.57
RTN3-213ENST00000543552 ATRQ13535 2644 aa11.5□□□□□ -0.57
RTN3-213ENST00000543552 ELOA3DA6NLF2 546 aaPredicted RBP11.49□□□□□ -0.57
RTN3-213ENST00000543552 TMEM229AB2RXF0 380 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 CLIC1O00299 241 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 OR2T1O43869 369 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 NDUFS7O75251 213 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 IFNA2P01563 188 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 BMP2P12643 396 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 ETS2P15036 469 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 SLC25A16P16260 332 aa11.49□□□□□ -0.57
RTN3-213ENST00000543552 CDH2P19022 906 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms