RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 HSPE1-MOB4S4R3N1 261 aa6.41□□□□□ -1.38
SRGAP1-206ENST00000543397 HTR3BO95264 441 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 CDK4P11802 303 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 MTHFD2P13995 350 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF12P17014 697 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 PFN3P60673 137 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 DEFB109BQ30KR1 87 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 NADK2Q4G0N4 442 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 AGAP7PQ5VUJ5 663 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC6A19Q695T7 634 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 AWAT2Q6E213 333 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF585AQ6P3V2 769 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 TIPARPQ7Z3E1 657 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 FBXL6Q8N531 539 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 OR8J2Q8NGG1 315 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 CASTOR1Q8WTX7 329 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 TRUB1Q8WWH5 349 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 MVB12AQ96EY5 273 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 C16orf58Q96GQ5 468 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 AGAP4Q96P64 663 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 VPS25Q9BRG1 176 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 TSPAN10Q9H1Z9 355 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 OR52D1Q9H346 318 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 CALHM2Q9HA72 323 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 DCAF13Q9NV06 445 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM118AQ9NWS6 357 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 FOXD3Q9UJU5 478 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 KLF13Q9Y2Y9 288 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 ASCC3Q8N3C0 2202 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM166BA8MTA8 275 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 CYR61O00622 381 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 KLK10O43240 276 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 DNAJB5O75953 348 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 GLSO94925 669 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 NSA2O95478 260 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 GPR3P46089 330 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 EIF3IQ13347 325 aaKnown RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 IL10RAQ13651 578 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 OTUD1Q5VV17 481 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 ASTLQ6HA08 431 aaPredicted RBP6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 DHRS13Q6UX07 377 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC35F2Q8IXU6 374 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 FCAMRQ8WWV6 532 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 GTF2H4Q92759 462 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 WACQ9BTA9 647 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 ABRACLQ9P1F3 81 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 EXTL2Q9UBQ6 330 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 KCNK7Q9Y2U2 307 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 CDK5RAP2Q96SN8 1893 aa6.4□□□□□ -1.38
SRGAP1-206ENST00000543397 BCORQ6W2J9 1755 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 TRAV27A0A087WT01 109 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 C13orf42A0A1B0GVH6 325 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 GNAO1P09471 354 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 UCHL1P09936 223 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 FURINP09958 794 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 SFTPCP11686 197 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 MAGEA3P43357 314 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 NIPAL3Q6P499 406 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 SYCE2Q6PIF2 218 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 ZFP41Q8N8Y5 198 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 BAHD1Q8TBE0 780 aaPredicted RBP6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 POTEKPQ9BYX7 375 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 NRSN2Q9GZP1 204 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 P2RY12Q9H244 342 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 NT5DC2Q9H857 520 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 ZNF69Q9UC07 566 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 DAPP1Q9UN19 280 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 RBMX2Q9Y388 322 aaKnown RBP6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 CABIN1Q9Y6J0 2220 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 TVP23AA6NH52 213 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 CD8B2A6NJW9 211 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 PRKRAO75569 313 aaKnown RBP6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 TGM6O95932 706 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 CEACAM5P06731 702 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 CD8BP10966 210 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 GTF2F2P13984 249 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 LIM2P55344 173 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 CLDN17P56750 224 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 RAB11BQ15907 218 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 DEFB124Q8NES8 71 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 THAP6Q8TBB0 222 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 FNDC8Q8TC99 324 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 TM4SF18Q96CE8 201 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC25A44Q96H78 314 aaPredicted RBP6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC30A2Q9BRI3 323 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 GHITMQ9H3K2 345 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 MEPEQ9NQ76 525 aaPredicted RBP6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 TMEM9Q9P0T7 183 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 KLHL13Q9P2N7 655 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 IL19Q9UHD0 177 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 NME7Q9Y5B8 376 aa6.4□□□□□ -1.39
SRGAP1-206ENST00000543397 PRAMEF27A3QJZ7 478 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 F5H0A9 414 aaPredicted RBP6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 SLC19A2O60779 497 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 LPLP06858 475 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CTSLP07711 333 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 NPR2P20594 1047 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 CHRNB4P30926 498 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 UGT2B10P36537 528 aa6.39□□□□□ -1.39
SRGAP1-206ENST00000543397 GFERP55789 205 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms