RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 SFXN5Q8TD22 340 aa12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 PGAM5Q96HS1 289 aa12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 PFDN5Q99471 154 aa12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 ALG12Q9BV10 488 aa12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 ZNF416Q9BWM5 594 aa12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 SDHAF2Q9NX18 166 aa12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 EXO1Q9UQ84 846 aaKnown RBP12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 MED16Q9Y2X0 877 aa12.83□□□□□ -0.35
RPS6KC1-206ENST00000543354 A0A1B0GWA3 101 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 DVL2O14641 736 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 ELOAQ14241 798 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 GPR157Q5UAW9 335 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 BHLHA9Q7RTU4 235 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 C12orf40Q86WS4 652 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 MCEMP1Q8IX19 187 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 ZFP82Q8N141 532 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 SLC39A11Q8N1S5 342 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 Q96M85 177 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 KATNBL1Q9H079 304 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 PARP12Q9H0J9 701 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 GABARAPL1Q9H0R8 117 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 SPNS1Q9H2V7 528 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 HIF3AQ9Y2N7 669 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 UNC13CQ8NB66 2214 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 KRBOX1C9JBD0 128 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 TMEM225BP0DP42 221 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 CCL5P13501 91 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 F3P13726 295 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 OPRD1P41143 372 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 RBMS2Q15434 407 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 RDH10Q8IZV5 341 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 PLPP7Q8NBV4 271 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 ELP5Q8TE02 316 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 PLA2G12AQ9BZM1 189 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 ADAM18Q9Y3Q7 739 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 PLEKHM1Q9Y4G2 1056 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 TSPAN11A1L157 253 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 C1QCP02747 245 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 EIF4EP06730 217 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 UBBP0CG47 229 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 UBCP0CG48 685 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 ITGB7P26010 798 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 RORAP35398 523 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 TAGLNQ01995 201 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 KIAA0040Q15053 153 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 SSX1Q16384 188 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 RPL22L1Q6P5R6 122 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 TMEM88Q6PEY1 159 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 RHOUQ7L0Q8 258 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 OR51S1Q8NGJ8 323 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 RASD2Q96D21 266 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 SAMD11Q96NU1 681 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 DCLRE1CQ96SD1 692 aaKnown RBP12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 AUNIPQ9H7T9 357 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 CYP8B1Q9UNU6 501 aa12.83□□□□□ -0.36
RPS6KC1-206ENST00000543354 PEX12O00623 359 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 SBK2P0C263 348 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 CPMP14384 443 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 TPMTP51580 245 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 PRPS1P60891 318 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 RUNX3Q13761 415 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 GNMTQ14749 295 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 TCEAL6Q6IPX3 200 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 MAMDC2Q7Z304 686 aaPredicted RBP12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 CALHM3Q86XJ0 350 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 KLHDC7BQ96G42 594 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 RNF170Q96K19 258 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 NXF5Q9H1B4 397 aaKnown RBP12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 POLMQ9NP87 494 aaPredicted RBP12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 NRIP3Q9NQ35 241 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 CLDND1Q9NY35 253 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 F5H5K5 113 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 TRAPPC6AO75865 159 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 LALBAP00709 142 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 F11P03951 625 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 TRAPPC2P0DI81 140 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 TRAPPC2BP0DI82 140 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 CTSAP10619 480 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 SFTPDP35247 375 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 HHEXQ03014 270 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 TRMT12Q53H54 448 aaKnown RBP12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 FAM74A1Q5RGS3 127 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 PXKQ7Z7A4 578 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 TP53I13Q8NBR0 393 aaPredicted RBP12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 OR5K2Q8NHB8 316 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 C2CD4CQ8TF44 421 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 SMARCD2Q92925 531 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 OR1F2PQ96R84 312 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 SELENOFO60613 162 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 ADH1BP00325 375 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 PPP3CBP16298 524 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 GBX1Q14549 363 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 ARHGAP19Q14CB8 494 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 CD276Q5ZPR3 534 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 PM20D2Q8IYS1 436 aa12.82□□□□□ -0.36
RPS6KC1-206ENST00000543354 OR5D18Q8NGL1 313 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms