RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 EMC3Q9P0I2 261 aa13.64□□□□□ -0.23
CSF1R-209ENST00000543093 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
CSF1R-209ENST00000543093 TRIM33Q9UPN9 1127 aa13.64□□□□□ -0.23
CSF1R-209ENST00000543093 MGAT4BQ9UQ53 548 aa13.64□□□□□ -0.23
CSF1R-209ENST00000543093 ZNF443Q9Y2A4 671 aaPredicted RBP13.64□□□□□ -0.23
CSF1R-209ENST00000543093 IGKV3D-15A0A087WSY6 115 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 A0A096LNT2 108 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 A0A0G2JPF8 293 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 A0A1W2PR80 420 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 CDHR4A6H8M9 788 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 CCT8L1PA6NM43 557 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 HNRNPCL2B2RXH8 293 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 HNRNPCL3B7ZW38 293 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 C5orf58C9J3I9 102 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 FAAHO00519 579 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 HNRNPCL1O60812 293 aaKnown RBP13.63□□□□□ -0.23
CSF1R-209ENST00000543093 EDF1O60869 148 aaKnown RBP13.63□□□□□ -0.23
CSF1R-209ENST00000543093 HNRNPCL4P0DMR1 293 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 POLR2HP52434 150 aaKnown RBP13.63□□□□□ -0.23
CSF1R-209ENST00000543093 ZSWIM7Q19AV6 140 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 C6orf52Q5T4I8 152 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 PRAMEF8Q5VWM4 474 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 PRAMEF7Q5VXH5 474 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 CLEC2AQ6UVW9 174 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 MTDHQ86UE4 582 aaKnown RBP13.63□□□□□ -0.23
CSF1R-209ENST00000543093 OR10H5Q8NGA6 315 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 BBS10Q8TAM1 723 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 TMEM158Q8WZ71 300 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 HTRA1Q92743 480 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 APH1AQ96BI3 265 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 DDIT4LQ96D03 193 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 DHRS9Q9BPW9 319 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 ARMC7Q9H6L4 198 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 CBLN4Q9NTU7 201 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 SLC25A37Q9NYZ2 338 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 DCTN4Q9UJW0 460 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 CORO2BQ9UQ03 480 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 NOSIPQ9Y314 301 aaKnown RBP13.63□□□□□ -0.23
CSF1R-209ENST00000543093 HDGFL3Q9Y3E1 203 aa13.63□□□□□ -0.23
CSF1R-209ENST00000543093 ALPK2Q86TB3 2170 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 PLCE1Q9P212 2302 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 TMED7-TICAM2A0A0A6YYA0 188 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 ZNF716A6NP11 495 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 PMS2P2O95744 297 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 NUDT7P0C024 238 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 BMP2P12643 396 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 NCF2P19878 526 aaPredicted RBP13.62□□□□□ -0.23
CSF1R-209ENST00000543093 CCNA2P20248 432 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 PTAFRP25105 342 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 CD40P25942 277 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 SLC1A3P43003 542 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 CLK1P49759 484 aaKnown RBP13.62□□□□□ -0.23
CSF1R-209ENST00000543093 DSCR9P59020 149 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 PDK3Q15120 406 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 TMEM249Q2WGJ8 235 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 PAGE3Q5JUK9 113 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 GCNT6Q5T4J0 391 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 KLHL17Q6TDP4 642 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 B3GLCTQ6Y288 498 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 MSRB3Q8IXL7 192 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 FBXL14Q8N1E6 418 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 MUC15Q8N387 334 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 NANOS1Q8WY41 292 aaKnown RBP13.62□□□□□ -0.23
CSF1R-209ENST00000543093 MAL2Q969L2 176 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 OR11A1Q9GZK7 315 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 RLIMQ9NVW2 624 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 IFT52Q9Y366 437 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 TMED7Q9Y3B3 224 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 SLC25A15Q9Y619 301 aa13.62□□□□□ -0.23
CSF1R-209ENST00000543093 A0A0G2JND7 137 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 TMEM72A0PK05 275 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 M0R1B8 84 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 PHF1O43189 567 aaPredicted RBP13.61□□□□□ -0.23
CSF1R-209ENST00000543093 ZNF208O43345 1280 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 DNPH1O43598 174 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 GKN3PP0CG01 181 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 FAM157CP0CG43 387 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 TACR3P29371 465 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 NTF4P34130 210 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 FABP6P51161 128 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 MAP2K6P52564 334 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 COPZ1P61923 177 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 LOXL1Q08397 574 aaPredicted RBP13.61□□□□□ -0.23
CSF1R-209ENST00000543093 RAB35Q15286 201 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 ZNF311Q5JNZ3 666 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 ADGRG3Q86Y34 549 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 ZNF525Q8N782 197 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 PIGXQ8TBF5 258 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 ARL5BQ96KC2 179 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 TNFRSF13CQ96RJ3 184 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 SPATA9Q9BWV2 254 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 C1QTNF6Q9BXI9 259 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 BCL2L10Q9HD36 194 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 SLC52A3Q9NQ40 469 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 ASB6Q9NWX5 421 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 TAS2R16Q9NYV7 291 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 VAPAQ9P0L0 249 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 SLAMF8Q9P0V8 285 aa13.61□□□□□ -0.23
CSF1R-209ENST00000543093 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.61□□□□□ -0.23
CSF1R-209ENST00000543093 LEF1Q9UJU2 399 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms