RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 SMIM28A0A1B0GU29 152 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 SYCE1LA8MT33 242 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 C5orf67F2Z3F1 127 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CCSO14618 274 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 TOR1AO14656 332 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 LIN7AO14910 233 aaPredicted RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 NDUFA2O43678 99 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CHST1O43916 411 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 N4BP1O75113 896 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 PSIP1O75475 530 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 CST4P01036 141 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 H1F0P07305 194 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 SERPINA6P08185 405 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 STSP08842 583 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 UBCP0CG48 685 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 MYOGP15173 224 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 GPX3P22352 226 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 GLRA1P23415 457 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 GIFP27352 417 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 PRDX3P30048 256 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 PPP2R1BP30154 601 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 HMGCLP35914 325 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CFHR2P36980 270 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 P2RY1P47900 373 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 ACOT2P49753 483 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 PDX1P52945 283 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 UBE2G2P60604 165 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 OSTNP61366 133 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CDKL1Q00532 357 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 EWSR1Q01844 656 aaKnown RBP eCLIP4.89□□□□□ -1.63
DDB1-219ENST00000541513 HHEXQ03014 270 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 SRYQ05066 204 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 ZP4Q12836 540 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 GRB7Q14451 532 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 HNF4GQ14541 408 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 MRPL23Q16540 153 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 SLC5A12Q1EHB4 618 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 MTX3Q5HYI7 312 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 STUMQ69YW2 141 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 SLC27A4Q6P1M0 643 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 UQCC3Q6UW78 93 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 NAPRTQ6XQN6 538 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 C3orf62Q6ZUJ4 267 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 HDDC2Q7Z4H3 204 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CLVS1Q8IUQ0 354 aaPredicted RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 CYB561A3Q8NBI2 242 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CCDC197Q8NCU1 140 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 OR11H4Q8NGC9 324 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 OR1L6Q8NGR2 347 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 SLC35F5Q8WV83 523 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 TFAP2BQ92481 460 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 GTF2H4Q92759 462 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 BPIFA2Q96DR5 249 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 ZFYVE19Q96K21 471 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 UHRF2Q96PU4 802 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 SYT11Q9BT88 431 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 DCTN5Q9BTE1 182 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 MED10Q9BTT4 135 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 TRIM15Q9C019 465 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 OR2B2Q9GZK3 357 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 RACGAP1Q9H0H5 632 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CXCL16Q9H2A7 254 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 CHST11Q9NPF2 352 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 RHBDL2Q9NX52 303 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 ELOVL2Q9NXB9 296 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 IL36AQ9UHA7 158 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 UBQLN1Q9UMX0 589 aaKnown RBP4.89□□□□□ -1.63
DDB1-219ENST00000541513 LRRC42Q9Y546 428 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 KCTD3Q9Y597 815 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 FADS3Q9Y5Q0 445 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 KPTNQ9Y664 436 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 SZT2Q5T011 3432 aa4.89□□□□□ -1.63
DDB1-219ENST00000541513 FUOMA2VDF0 154 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ZIC3O60481 467 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 GMDSO60547 372 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 SRPX2O60687 465 aaPredicted RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 BRI3O95415 125 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 RAB3DO95716 219 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 TMEM50AO95807 157 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 FADS2O95864 444 aaKnown RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 IGHG3P01860 377 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 H2BFMP0C1H6 154 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 CBLP22681 906 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 AADACP22760 399 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 RBMS1P29558 406 aaKnown RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 CCKBRP32239 447 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 GTF2H1P32780 548 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 STX2P32856 288 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 HPCAL1P37235 193 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 KIR3DL2P43630 455 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 CDC34P49427 236 aaPredicted RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 SERPINB9P50453 376 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 UCNP55089 124 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ISL1P61371 349 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PPP2CBP62714 309 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 PPP2CAP67775 309 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 HOXA4Q00056 320 aaPredicted RBP4.88□□□□□ -1.63
DDB1-219ENST00000541513 GUCY2DQ02846 1103 aa4.88□□□□□ -1.63
DDB1-219ENST00000541513 ZNF33BQ06732 778 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms