RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 POLDIP3Q9BY77 421 aaKnown RBP11.62□□□□□ -0.55
LTBR-208ENST00000541005 PCDHAC1Q9H158 963 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 ZNF226Q9NYT6 803 aa11.62□□□□□ -0.55
LTBR-208ENST00000541005 OTOGQ6ZRI0 2925 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 IGKV1D-42A0A075B6H8 117 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 A0A087WUJ7 227 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 DEFB108AA8MXU0 73 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 M0R3H8 397 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 AHSA1O95433 338 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 COX5AP20674 150 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 EDNRAP25101 427 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 PRDX6P30041 224 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 GYS2P54840 703 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 OR1Q1Q15612 314 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 NPTX1Q15818 432 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 OTUD3Q5T2D3 398 aaPredicted RBP11.61□□□□□ -0.55
LTBR-208ENST00000541005 ZNF613Q6PF04 617 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 CPLX4Q7Z7G2 160 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 CXorf67Q86X51 503 aaPredicted RBP11.61□□□□□ -0.55
LTBR-208ENST00000541005 OR6T1Q8NGN1 323 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 TMEM45BQ96B21 275 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 SLC47A1Q96FL8 570 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 USB1Q9BQ65 265 aaKnown RBP11.61□□□□□ -0.55
LTBR-208ENST00000541005 TAPBPLQ9BX59 468 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 KLHL4Q9C0H6 718 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 ACTR6Q9GZN1 396 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 FAM107BQ9H098 131 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 EFCAB1Q9HAE3 211 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 TMEM27Q9HBJ8 222 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 CMTM6Q9NX76 183 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 MALT1Q9UDY8 824 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 SLC9A8Q9Y2E8 581 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 NOSIPQ9Y314 301 aaKnown RBP11.61□□□□□ -0.55
LTBR-208ENST00000541005 FLVCR1Q9Y5Y0 555 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 MED13LQ71F56 2210 aa11.61□□□□□ -0.55
LTBR-208ENST00000541005 CCT8L1PA6NM43 557 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 CASKO14936 926 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 SIAH2O43255 324 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 AKR7A3O95154 331 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 VAMP5O95183 116 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 THBDP07204 575 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 NTF4P34130 210 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 ITGADQ13349 1161 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 POU4F3Q15319 338 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 SFRP5Q5T4F7 317 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 FAM69AQ5T7M9 428 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 C22orf34Q6ZV56 151 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 PIGWQ7Z7B1 504 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 CDC20BQ86Y33 519 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 SLC15A3Q8IY34 581 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 MICU2Q8IYU8 434 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 TMEM99Q8N816 258 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 STEAP2Q8NFT2 490 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 OR2T12Q8NG77 320 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 OR4D11Q8NGI4 311 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 OR6S1Q8NH40 331 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 APH1AQ96BI3 265 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 CMTM5Q96DZ9 223 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 KTI12Q96EK9 354 aaPredicted RBP11.6□□□□□ -0.55
LTBR-208ENST00000541005 MCHR1Q99705 422 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 HOPXQ9BPY8 73 aaPredicted RBP11.6□□□□□ -0.55
LTBR-208ENST00000541005 TMEM43Q9BTV4 400 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 PRR14Q9BWN1 585 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 ADPRHL2Q9NX46 363 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 SELENONQ9NZV5 590 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 PRSS50Q9UI38 385 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 USP22Q9UPT9 525 aa11.6□□□□□ -0.55
LTBR-208ENST00000541005 TRAV36DV7A0A075B6V5 113 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 AIM2O14862 343 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 CHP2O43745 196 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 OR2T1O43869 369 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 ADAP00813 363 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 IFNA14P01570 189 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 LOXP28300 417 aaPredicted RBP11.59□□□□□ -0.55
LTBR-208ENST00000541005 RPS5P46782 204 aaKnown RBP11.59□□□□□ -0.55
LTBR-208ENST00000541005 NUDT2P50583 147 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 CDH12P55289 794 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 FBXW9Q5XUX1 488 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 LINC00114Q6XXX2 140 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 ZNF100Q8IYN0 542 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 ADPRHL1Q8NDY3 354 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 SLC26A7Q8TE54 656 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 NINJ1Q92982 152 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 KISS1RQ969F8 398 aaPredicted RBP11.59□□□□□ -0.55
LTBR-208ENST00000541005 S100PBPQ96BU1 408 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 ZNF775Q96BV0 537 aaPredicted RBP11.59□□□□□ -0.55
LTBR-208ENST00000541005 EPYCQ99645 322 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 PLEKHF2Q9H8W4 249 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 PARPBPQ9NWS1 579 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 ABCD2Q9UBJ2 740 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 BAG5Q9UL15 447 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 RASD1Q9Y272 281 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 ARL2BPQ9Y2Y0 163 aa11.59□□□□□ -0.55
LTBR-208ENST00000541005 A0A1W2PPR1 153 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 ELOVL7A1L3X0 281 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 PDLIM1O00151 329 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 NME4O00746 187 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 NDUFAB1O14561 156 aa11.58□□□□□ -0.56
LTBR-208ENST00000541005 MRPL33O75394 65 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms