RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 ZNF836Q6ZNA1 936 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 RANBP3LQ86VV4 465 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-208ENST00000540683 CCDC36Q8IYA8 594 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 WFDC11Q8NEX6 87 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 MFSD8Q8NHS3 518 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 SMAP2Q8WU79 429 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-208ENST00000540683 RASSF5Q8WWW0 418 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 SLC38A4Q969I6 547 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 VPS33AQ96AX1 596 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 TMEM19Q96HH6 336 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 ARL5BQ96KC2 179 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 MAGEB18Q96M61 343 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 ADAD1Q96M93 576 aaKnown RBP9.18□□□□□ -0.94
CDCA3-208ENST00000540683 HS3ST6Q96QI5 342 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 ZNF300Q96RE9 604 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-208ENST00000540683 SH3GL1Q99961 368 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 OR11A1Q9GZK7 315 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 TMEM38AQ9H6F2 299 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 DLL4Q9NR61 685 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 CCDC167Q9P0B6 97 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-208ENST00000540683 LEF1Q9UJU2 399 aaPredicted RBP9.18□□□□□ -0.94
CDCA3-208ENST00000540683 ANGPT4Q9Y264 503 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 B3GALT5Q9Y2C3 310 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 FLVCR1Q9Y5Y0 555 aa9.18□□□□□ -0.94
CDCA3-208ENST00000540683 A0A1W2PPR1 153 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 PRAMEF27A3QJZ7 478 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 LIPT2A6NK58 231 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 AQP7P3A6NL99 342 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 C9JVG2 144 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 ZNF587BE7ETH6 402 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 HEXAP06865 529 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 ZNF43P17038 809 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 LOXP28300 417 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-208ENST00000540683 MVDP53602 400 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 CDH11P55287 796 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 PPP2R2BQ00005 443 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 CDK6Q00534 326 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 CHRNB3Q05901 458 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 BSPH1Q075Z2 132 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 FAPQ12884 760 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 CEACAM7Q14002 265 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 SLC17A1Q14916 467 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 OR7A5Q15622 319 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 AGKQ53H12 422 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 INTS11Q5TA45 600 aaKnown RBP9.17□□□□□ -0.94
CDCA3-208ENST00000540683 ZNF544Q6NX49 715 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 ULK3Q6PHR2 472 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 AAED1Q7RTV5 226 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 GPAT4Q86UL3 456 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 FBXL14Q8N1E6 418 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 LSMEM1Q8N8F7 131 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 OR9K2Q8NGE7 335 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 SLC47A1Q96FL8 570 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 BOD1Q96IK1 185 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 Q96MF0 132 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 HS6ST2Q96MM7 605 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 MUS81Q96NY9 551 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 KLHDC3Q9BQ90 382 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 OCSTAMPQ9BR26 566 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 PAIP1Q9H074 479 aaKnown RBP9.17□□□□□ -0.94
CDCA3-208ENST00000540683 SLCO5A1Q9H2Y9 848 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 TMEM27Q9HBJ8 222 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 CISD1Q9NZ45 108 aaKnown RBP9.17□□□□□ -0.94
CDCA3-208ENST00000540683 TESQ9UGI8 421 aaKnown RBP9.17□□□□□ -0.94
CDCA3-208ENST00000540683 PRSS50Q9UI38 385 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 ING1Q9UK53 422 aaPredicted RBP9.17□□□□□ -0.94
CDCA3-208ENST00000540683 LAMP3Q9UQV4 416 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 CORINQ9Y5Q5 1042 aa9.17□□□□□ -0.94
CDCA3-208ENST00000540683 NF1P21359 2839 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 RAI1Q7Z5J4 1906 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-208ENST00000540683 CLDN24A6NM45 220 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 AP3D1O14617 1153 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 AIM2O14862 343 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 RAD51DO75771 328 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 NPPAP01160 153 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 C8BP07358 591 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 TROVE2P10155 538 aaKnown RBP eCLIP9.16□□□□□ -0.94
CDCA3-208ENST00000540683 ARAFP10398 606 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 GPX2P18283 190 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 ACAA2P42765 397 aaKnown RBP9.16□□□□□ -0.94
CDCA3-208ENST00000540683 UBE2NP61088 152 aaKnown RBP9.16□□□□□ -0.94
CDCA3-208ENST00000540683 FAM69AQ5T7M9 428 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 DHRS4L2Q6PKH6 230 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 SLC2A7Q6PXP3 512 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 SLC22A25Q6T423 547 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 C6orf89Q6UWU4 347 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 OLIG3Q7RTU3 272 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 MAVSQ7Z434 540 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 VRK2Q86Y07 508 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 ARMC8Q8IUR7 673 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 C11orf65Q8NCR3 313 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 HIPK4Q8NE63 616 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 OR9I1Q8NGQ6 314 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 OR6S1Q8NH40 331 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 ZNF775Q96BV0 537 aaPredicted RBP9.16□□□□□ -0.94
CDCA3-208ENST00000540683 COX4I2Q96KJ9 171 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 DHRS9Q9BPW9 319 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 B3GAT2Q9NPZ5 323 aa9.16□□□□□ -0.94
CDCA3-208ENST00000540683 RLIMQ9NVW2 624 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms