RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 FIGLAQ6QHK4 219 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 Q6ZTK2 550 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 SPERTQ8NA61 448 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 UXS1Q8NBZ7 420 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 CTHRC1Q96CG8 243 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 MRPL48Q96GC5 212 aaKnown RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 LCORQ96JN0 433 aaPredicted RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 GFI1Q99684 422 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 KXD1Q9BQD3 176 aa11.29□□□□□ -0.6
NPC1-202ENST00000540608 MRPS2Q9Y399 296 aaKnown RBP11.29□□□□□ -0.6
NPC1-202ENST00000540608 A0A1B0GUH1 482 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 CIB4A0PJX0 185 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 AIPO00170 330 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 SLC31A1O15431 190 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 CFDP00746 253 aaPredicted RBP11.28□□□□□ -0.6
NPC1-202ENST00000540608 RRASP10301 218 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 ZNF250P15622 560 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 AK4P27144 223 aaPredicted RBP11.28□□□□□ -0.6
NPC1-202ENST00000540608 DPP4P27487 766 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 EMDP50402 254 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 AANATQ16613 207 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 HES5Q5TA89 166 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 GLRX5Q86SX6 157 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 SIX5Q8N196 739 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 FTMTQ8N4E7 242 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 OR52I2Q8NH67 350 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 CEP76Q8TAP6 659 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 HOXB13Q92826 284 aaPredicted RBP11.28□□□□□ -0.6
NPC1-202ENST00000540608 TWSG1Q9GZX9 223 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 OR10A4Q9H209 315 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 DNAJB12Q9NXW2 375 aaKnown RBP11.28□□□□□ -0.6
NPC1-202ENST00000540608 KLHL9Q9P2J3 617 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 MAB21L2Q9Y586 359 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 ENTPD2Q9Y5L3 495 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 TRBV23OR9-2A0A075B6M9 112 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 SULT1B1O43704 296 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 PSMB10P40306 273 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 TMEM255AQ5JRV8 349 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 PRSS41Q7RTY9 318 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 OR6V1Q8N148 313 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 ZNF614Q8N883 585 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 RPS4Y2Q8TD47 263 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 FCAMRQ8WWV6 532 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 OMA1Q96E52 524 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 CCDC120Q96HB5 630 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 GSX2Q9BZM3 304 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 EVA1BQ9NVM1 165 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 COPS3Q9UNS2 423 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 ATG2AQ2TAZ0 1938 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 SCN2AQ99250 2005 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 M0R233 179 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 KRT33AO76009 404 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 OR7A10O76100 309 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 TOXO94900 526 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 VEGFCP49767 419 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 PRRT3Q5FWE3 981 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 SLC35D3Q5M8T2 416 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 ULK3Q6PHR2 472 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 FCRLAQ7L513 359 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 YAF2Q8IY57 180 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 NPEPL1Q8NDH3 523 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 SLC25A38Q96DW6 304 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 DDOQ99489 341 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 POT1Q9NUX5 634 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 PCOLCE2Q9UKZ9 415 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 ZNF281Q9Y2X9 895 aa11.28□□□□□ -0.6
NPC1-202ENST00000540608 POM121BA6NF01 834 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 MCIDASD6RGH6 385 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 H0YGG7 62 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 GUSBP08236 651 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 GDI1P31150 447 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 ARF3P61204 181 aaPredicted RBP11.27□□□□□ -0.61
NPC1-202ENST00000540608 MFSD13AQ14CX5 517 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 ZC3H14Q6PJT7 736 aaKnown RBP11.27□□□□□ -0.61
NPC1-202ENST00000540608 APOOLQ6UXV4 268 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 DPY19L2P2Q6ZN68 376 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 SPICQ8N5J4 248 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 OR52R1Q8NGF1 315 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 OR5T3Q8NGG3 340 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 OR1E3Q8WZA6 343 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 RERGQ96A58 199 aaPredicted RBP11.27□□□□□ -0.61
NPC1-202ENST00000540608 SGTBQ96EQ0 304 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 S100A16Q96FQ6 103 aaKnown RBP11.27□□□□□ -0.61
NPC1-202ENST00000540608 ZFYVE21Q9BQ24 234 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 RPP25Q9BUL9 199 aaKnown RBP11.27□□□□□ -0.61
NPC1-202ENST00000540608 RBCK1Q9BYM8 510 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 C2orf42Q9NWW7 574 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 FBXL3Q9UKT7 428 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 TBC1D3DA0A087WVF3 549 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 TBC1D3IA0A087WXS9 549 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.27□□□□□ -0.61
NPC1-202ENST00000540608 TUBAL3A6NHL2 446 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 TBC1D3LB9A6J9 549 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 K7EQS6 105 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 SELENOFO60613 162 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 SCO1O75880 301 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 CBX7O95931 251 aa11.27□□□□□ -0.61
NPC1-202ENST00000540608 HOXC4P09017 264 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms