RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 LRG1P02750 347 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 RLN1P04808 185 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 DHPSP49366 369 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 SUCLG1P53597 346 aaKnown RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 PITPNAQ00169 270 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF345Q14585 488 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 NDUFA9Q16795 377 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 MST1LQ2TV78 715 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 XKR6Q5GH73 641 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 EOGTQ5NDL2 527 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 FAAP20Q6NZ36 180 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 SFXN4Q6P4A7 337 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 DHRS11Q6UWP2 260 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 APOOLQ6UXV4 268 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 SZRD1Q7Z422 152 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 GID4Q8IVV7 300 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 C10orf53Q8N6V4 93 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF283Q8N7M2 679 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF485Q8NCK3 441 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 OR8J1Q8NGP2 316 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 DNAJB3Q8WWF6 145 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF514Q96K75 400 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 PTCHD1Q96NR3 888 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 UTP23Q9BRU9 249 aaKnown RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 DOHHQ9BU89 302 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 CBLN4Q9NTU7 201 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 CALML5Q9NZT1 146 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 MARCH4Q9P2E8 410 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 MKI67P46013 3256 aaKnown RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 OR52A4PA6NMU1 304 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 RNASEK-C17orf49H0YIS7 233 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 CCL22O00626 93 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 SIAH2O43255 324 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 TSPAN2O60636 221 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 MAFKO60675 156 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 CLDN11O75508 207 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 SPARCP09486 303 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 LIMS3P0CW19 117 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 LIMS4P0CW20 117 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 OR12D1P0DN82 309 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 SERPINF1P36955 418 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 MECP2P51608 486 aaKnown RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 TEAD2Q15562 447 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 SYT14P1Q58G82 188 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 HIST2H3PS2Q5TEC6 136 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 GLT8D1Q68CQ7 371 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 C12orf73Q69YU5 71 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 PGBD2Q6P3X8 592 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ULK3Q6PHR2 472 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 C11orf88Q6PI97 169 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 IZUMO1Q8IYV9 350 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ADPRHL1Q8NDY3 354 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 OR56B2PQ8NGI1 322 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 PIGXQ8TBF5 258 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 STAG3L4Q8TBR4 150 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 FAM210BQ96KR6 192 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 PACRGQ96M98 296 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 WDR92Q96MX6 357 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ALKBH3Q96Q83 286 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-214ENST00000540539 ATXN3LQ9H3M9 355 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 PCDHB11Q9Y5F2 797 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 MYO10Q9HD67 2058 aa8.73□□□□□ -1.01
CLIP1-214ENST00000540539 PRAMEF25A6NGN4 478 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 GGT3PA6NGU5 568 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF724A8MTY0 619 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 CLIC1O00299 241 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 CDC14BO60729 498 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 OR2F2O95006 317 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 RPLP2P05387 115 aaKnown RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 NME2P22392 152 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 AGTR1P30556 359 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 S100A3P33764 101 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 RPS10P46783 165 aaKnown RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 GPR15P49685 360 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 LSM11P83369 360 aaKnown RBP eCLIP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 EFNB1P98172 346 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 SRSF11Q05519 484 aaKnown RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 OR2F1Q13607 317 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 SOWAHAQ2M3V2 549 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 HEPN1Q6WQI6 88 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 WDR88Q6ZMY6 472 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 TRAPPC5Q8IUR0 188 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ZBTB8OSQ8IWT0 167 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ETFBKMTQ8IXQ9 262 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ZNF619Q8N2I2 560 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 SORCS1Q8WY21 1168 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 MRPS31Q92665 395 aaKnown RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 NT5C3BQ969T7 300 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 COPS8Q99627 209 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ADAM2Q99965 735 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 NMNAT1Q9HAN9 279 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-214ENST00000540539 ACER3Q9NUN7 267 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 IL20RAQ9UHF4 553 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 NOD1Q9Y239 953 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 A0A087WUJ7 227 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 A0A0G2JN53 185 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 A0A1W2PN81 502 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 A0A1W2PPE2 198 aa8.72□□□□□ -1.01
CLIP1-214ENST00000540539 RNF222A6NCQ9 220 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms