RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RLN3Q8WXF3 142 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 ACOT11Q8WXI4 607 aaPredicted RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 RCN3Q96D15 328 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 ASB9Q96DX5 294 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 ALKBH3Q96Q83 286 aaPredicted RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 ZNF382Q96SR6 550 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 MUC13Q9H3R2 512 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 PPP1R3EQ9H7J1 279 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 ZCCHC3Q9NUD5 404 aaKnown RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 PDP1Q9P0J1 537 aaPredicted RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 GSKIPQ9P0R6 139 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 HCN3Q9P1Z3 774 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUX4Q9UBX2 424 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 NDOR1Q9UHB4 597 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 UTS2RQ9UKP6 389 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 PADI2Q9Y2J8 665 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 MAST4O15021 2626 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 TCRBV3S1A0A5B6 114 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GABRR3A8MPY1 467 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 SMLR1H3BR10 107 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 ADAM10O14672 748 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 WNT9AO14904 365 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 EREGO14944 169 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GGCTO75223 188 aaKnown RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 AOAHP28039 575 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 PMELP40967 661 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 EVX1P49640 407 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 EMP2P54851 167 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 RPS7P62081 194 aaKnown RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 CNTN1Q12860 1018 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 NR6A1Q15406 480 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DPY19L1Q2PZI1 675 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 PRAMEF14Q5SWL7 426 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 SLC35F1Q5T1Q4 408 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 NCMAPQ5T1S8 102 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 C18orf63Q68DL7 685 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GOLGA7Q7Z5G4 137 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 LDLRAD3Q86YD5 345 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 PGAM4Q8N0Y7 254 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DCBLD1Q8N8Z6 715 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 RCBTB1Q8NDN9 531 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 OR52B6Q8NGF0 335 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 GRHL3Q8TE85 626 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 DUSP19Q8WTR2 217 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 CDS1Q92903 461 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 ARRDC3Q96B67 414 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 CXorf58Q96LI9 332 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 CDK15Q96Q40 435 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 NODALQ96S42 347 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 TUBB1Q9H4B7 451 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 PTGES2Q9H7Z7 377 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 KRCC1Q9NPI7 259 aaPredicted RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 MKKSQ9NPJ1 570 aaPredicted RBP11.63□□□□□ -0.55
DDX55-206ENST00000539934 TMEM9BQ9NQ34 198 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 CCDC167Q9P0B6 97 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 KCNG2Q9UJ96 466 aa11.63□□□□□ -0.55
DDX55-206ENST00000539934 OR2AG2A6NM03 316 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 EPHX1P07099 455 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 AGAP20933 346 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 APEX1P27695 318 aaKnown RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 EPHA4P54764 986 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 TMEM33P57088 247 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 EEFSECP57772 596 aaKnown RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 NCS1P62166 190 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 LSM6P62312 80 aaKnown RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 AGKQ53H12 422 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 C2orf27AQ580R0 203 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ZNF648Q5T619 568 aaPredicted RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 TBC1D3GQ6DHY5 549 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 CLEC9AQ6UXN8 241 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 UBE2R2Q712K3 238 aaPredicted RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 SYNPOQ8N3V7 929 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 CBR4Q8N4T8 237 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 BTN2A2Q8WVV5 523 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 KAT2AQ92830 837 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 RCC1LQ96I51 464 aaKnown RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 NPAS2Q99743 824 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 SUCNR1Q9BXA5 334 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 SLC29A3Q9BZD2 475 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 FN3KQ9H479 309 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 IPPKQ9H8X2 491 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 WDR41Q9HAD4 459 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 RDH14Q9HBH5 336 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 SRA1Q9HD15 236 aaKnown RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 ABCB9Q9NP78 766 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 PPIEQ9UNP9 301 aaKnown RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 DYRK1BQ9Y463 629 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ELOA3CA0A087WX78 387 aaPredicted RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 TCRBV16S1A1N1A0A5B0 115 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ELOA3DA6NLF2 546 aaPredicted RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 C1QTNF3-AMACRE9PGA6 284 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 M0R233 179 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 INPP4BO15327 924 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 TAPBPO15533 448 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 RNF13O43567 381 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 AP2A2O94973 939 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 ALDOCP09972 364 aaKnown RBP11.62□□□□□ -0.55
DDX55-206ENST00000539934 G6PDP11413 515 aa11.62□□□□□ -0.55
DDX55-206ENST00000539934 CEACAM1P13688 526 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms