RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 FREM1Q5H8C1 2179 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 TSPO2Q5TGU0 170 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 C1QTNF6Q9BXI9 259 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 AMBRA1Q9C0C7 1298 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 ADAM19Q9H013 955 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 WDR55Q9H6Y2 383 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-211ENST00000539843 TPT1P8Q9HAU6 139 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 SLC7A10Q9NS82 523 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 ADPRHL2Q9NX46 363 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 RPS6KB2Q9UBS0 482 aa13.43□□□□□ -0.26
UBE3B-211ENST00000539843 ZNF443Q9Y2A4 671 aaPredicted RBP13.43□□□□□ -0.26
UBE3B-211ENST00000539843 A0A0G2JPF8 293 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 LIPT2A6NK58 231 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 HNRNPCL2B2RXH8 293 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 HNRNPCL3B7ZW38 293 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 C5orf58C9J3I9 102 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 H7C417 338 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 UBDO15205 165 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 HNRNPCL1O60812 293 aaKnown RBP13.42□□□□□ -0.26
UBE3B-211ENST00000539843 NDUFS7O75251 213 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 AKR7A3O95154 331 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 THBS1P07996 1170 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 GKN3PP0CG01 181 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 ZCCHC18P0CG32 403 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 HNRNPCL4P0DMR1 293 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 CDH2P19022 906 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-211ENST00000539843 PTNP21246 168 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 SPOCK1Q08629 439 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 TNFAIP8L3Q5GJ75 292 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 COX20Q5RI15 118 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 PRAMEF8Q5VWM4 474 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 PRAMEF7Q5VXH5 474 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 HMBOX1Q6NT76 420 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 ZNF836Q6ZNA1 936 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 DNM1P46Q6ZS02 220 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 CXXC5Q7LFL8 322 aaKnown RBP13.42□□□□□ -0.26
UBE3B-211ENST00000539843 VRK2Q86Y07 508 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 MIER2Q8N344 545 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 FAM168AQ92567 244 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 ZNF317Q96PQ6 595 aaPredicted RBP13.42□□□□□ -0.26
UBE3B-211ENST00000539843 MANSC1Q9H8J5 431 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 RAB21Q9UL25 225 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 RASD1Q9Y272 281 aa13.42□□□□□ -0.26
UBE3B-211ENST00000539843 ZC3H12DA2A288 527 aaKnown RBP13.41□□□□□ -0.26
UBE3B-211ENST00000539843 VSTM5A8MXK1 200 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 PDLIM1O00151 329 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 AKAP8O43823 692 aaKnown RBP13.41□□□□□ -0.26
UBE3B-211ENST00000539843 SNNO75324 88 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-211ENST00000539843 ERLIN1O75477 346 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 ETFAP13804 333 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 IL12AP29459 219 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 EFNA4P52798 201 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 SNRPD2P62316 118 aaKnown RBP13.41□□□□□ -0.26
UBE3B-211ENST00000539843 IRX1P78414 480 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-211ENST00000539843 PLAURQ03405 335 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 KRTAP1-1Q07627 177 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 MPP2Q14168 576 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 ZNF311Q5JNZ3 666 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 C1orf140Q5VVS0 124 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 C11orf71Q6IPW1 123 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 HIPK1Q86Z02 1210 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 TMEM99Q8N816 258 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 STK35Q8TDR2 534 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 AURKBQ96GD4 344 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-211ENST00000539843 TMEM19Q96HH6 336 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 SPATA9Q9BWV2 254 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 RLIMQ9NVW2 624 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 SELENONQ9NZV5 590 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 FBXO9Q9UK97 447 aaPredicted RBP13.41□□□□□ -0.26
UBE3B-211ENST00000539843 PRR14LQ5THK1 2151 aa13.41□□□□□ -0.26
UBE3B-211ENST00000539843 DSPPQ9NZW4 1301 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 IGHV4-30-2A0A087WSY4 118 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 CRYAAP02489 173 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 NTF4P34130 210 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 POLR2JP52435 117 aaKnown RBP13.4□□□□□ -0.26
UBE3B-211ENST00000539843 SLC18A1P54219 525 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 SH3BGRP55822 239 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-211ENST00000539843 LOXL1Q08397 574 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-211ENST00000539843 FADDQ13158 208 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 NIPAL3Q6P499 406 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 C5orf46Q6UWT4 87 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 WDR31Q8NA23 367 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 BBS10Q8TAM1 723 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 SLC38A5Q8WUX1 472 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 PROX1Q92786 737 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 SLC35B4Q969S0 331 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 TNFRSF13CQ96RJ3 184 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 MDFIQ99750 246 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 SDR39U1Q9NRG7 319 aaPredicted RBP13.4□□□□□ -0.26
UBE3B-211ENST00000539843 CDC42EP3Q9UKI2 254 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 ADAM21Q9UKJ8 722 aa13.4□□□□□ -0.26
UBE3B-211ENST00000539843 CADP27708 2225 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 ELOA3DA6NLF2 546 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-211ENST00000539843 ATP6V1G2-DDX39BF2Z307 99 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 FRS3O43559 492 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 ERCC1P07992 297 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-211ENST00000539843 TFPTP0C1Z6 253 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 ZNF43P17038 809 aa13.39□□□□□ -0.27
UBE3B-211ENST00000539843 NCALDP61601 193 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms