RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NMUP48645 174 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 HSPA2P54652 639 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 DLX1P56177 255 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 ACTA2P62736 377 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 ACTC1P68032 377 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 SCGB2A2Q13296 93 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 PSG5Q15238 335 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 ATP6AP1Q15904 470 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 TPD52L1Q16890 204 aaPredicted RBP2.23□□□□□ -2.05
CCDC7-209ENST00000539197 CCDC57Q2TAC2 916 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 LRRC10Q5BKY1 277 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 BLOC1S2Q6QNY1 142 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 Q6ZN92 141 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 RDH10Q8IZV5 341 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 CENPLQ8N0S6 344 aaPredicted RBP2.23□□□□□ -2.05
CCDC7-209ENST00000539197 ARL10Q8N8L6 244 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 OR10G2Q8NGC3 310 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 ACER1Q8TDN7 264 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 MRPL38Q96DV4 380 aaKnown RBP2.23□□□□□ -2.05
CCDC7-209ENST00000539197 CCNL2Q96S94 520 aaPredicted RBP2.23□□□□□ -2.05
CCDC7-209ENST00000539197 RWDD1Q9H446 243 aaPredicted RBP2.23□□□□□ -2.05
CCDC7-209ENST00000539197 SIAEQ9HAT2 523 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 LHX9Q9NQ69 397 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 SMPD3Q9NY59 655 aaPredicted RBP2.23□□□□□ -2.05
CCDC7-209ENST00000539197 SLC25A37Q9NYZ2 338 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 GNPTGQ9UJJ9 305 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 NPIPA1Q9UND3 350 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 A0A087WZY1 265 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 F8WDY8 70 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 LANCL1O43813 399 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 CXCL13O43927 109 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 PRPSAP2O60256 369 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 UGT1A9O60656 530 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 MFN2O95140 757 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 KLK3P07288 261 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-209ENST00000539197 HPGDP15428 266 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 ABOP16442 354 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 UQCRC2P22695 453 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 HTR2AP28223 471 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 ARRB1P49407 418 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-209ENST00000539197 MXD4Q14582 209 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-209ENST00000539197 RFX4Q33E94 735 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 TMEM41BQ5BJD5 291 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 PLBD1Q6P4A8 553 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 ZNF621Q6ZSS3 439 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 MOB3BQ86TA1 216 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 NPBQ8NG41 125 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 DTX3LQ8TDB6 740 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 FGF11Q92914 225 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 EXOSC8Q96B26 276 aaKnown RBP2.22□□□□□ -2.05
CCDC7-209ENST00000539197 SH3YL1Q96HL8 342 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-209ENST00000539197 RIT2Q99578 217 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 CDX2Q99626 313 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-209ENST00000539197 SUDS3Q9H7L9 328 aaPredicted RBP2.22□□□□□ -2.05
CCDC7-209ENST00000539197 ODF2LQ9ULJ1 636 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 TRAPPC4Q9Y296 219 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 U3KQV3 271 aa2.22□□□□□ -2.05
CCDC7-209ENST00000539197 DCTN6O00399 190 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 POLR2EP19388 210 aaKnown RBP2.21□□□□□ -2.06
CCDC7-209ENST00000539197 PKNOX1P55347 436 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 MEF2BQ02080 365 aaPredicted RBP2.21□□□□□ -2.06
CCDC7-209ENST00000539197 ZNF763Q0D2J5 394 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 OTOGLQ3ZCN5 2332 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 PARP15Q460N3 678 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 FRMPD2BQ6IN97 320 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 FAM71F2Q6NXP2 309 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 CNSTQ6PJW8 725 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 ISLR2Q6UXK2 745 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 PAQR7Q86WK9 346 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 CLEC4FQ8N1N0 589 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 ZNF619Q8N2I2 560 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 OR4D9Q8NGE8 314 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 OR10G9Q8NGN4 311 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 UBALD1Q8TB05 177 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 FRZBQ92765 325 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 PAGE5Q96GU1 130 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 FCRL1Q96LA6 429 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 GPA33Q99795 319 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 C20orf85Q9H1P6 137 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 DPH5Q9H2P9 285 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 CLMPQ9H6B4 373 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 DMAP1Q9NPF5 467 aaPredicted RBP2.21□□□□□ -2.06
CCDC7-209ENST00000539197 ZNF226Q9NYT6 803 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 STAP1Q9ULZ2 295 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 AK6Q9Y3D8 172 aaKnown RBP2.21□□□□□ -2.06
CCDC7-209ENST00000539197 SLC25A15Q9Y619 301 aa2.21□□□□□ -2.06
CCDC7-209ENST00000539197 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
CCDC7-209ENST00000539197 MAPK13O15264 365 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 CLDN3O15551 220 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 MBTPS2O43462 519 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 COX5AP20674 150 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 CMA1P23946 247 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 TDO2P48775 406 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 UBE2AP49459 152 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 ACADVLP49748 655 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 PJVKQ0ZLH3 352 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 ASPHQ12797 758 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 SMARCB1Q12824 385 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 INAQ16352 499 aa2.2□□□□□ -2.06
CCDC7-209ENST00000539197 MICBQ29980 383 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms