RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CXCR1P25024 350 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 ACAA2P42765 397 aaKnown RBP10.94□□□□□ -0.66
VAMP1-206ENST00000538970 P2RY4P51582 365 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 VLDLRP98155 873 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 OR7A5Q15622 319 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 CHRFAM7AQ494W8 412 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 CEP85LQ5SZL2 805 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 PODNL1Q6PEZ8 512 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 AAED1Q7RTV5 226 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 VRK2Q86Y07 508 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 POMGNT2Q8NAT1 580 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 GLB1L3Q8NCI6 653 aaPredicted RBP10.94□□□□□ -0.66
VAMP1-206ENST00000538970 C10orf105Q8TEF2 133 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 ZBTB9Q96C00 473 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 BOD1Q96IK1 185 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 TNFRSF13CQ96RJ3 184 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 PAIP2Q9BPZ3 127 aaKnown RBP10.94□□□□□ -0.66
VAMP1-206ENST00000538970 PIF1Q9H611 641 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 MANSC1Q9H8J5 431 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 ABCA1O95477 2261 aa10.94□□□□□ -0.66
VAMP1-206ENST00000538970 PLCE1Q9P212 2302 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 ANK2Q01484 3957 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 TRPC5OSA6NMA1 111 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 A8MVM7 634 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 FRS3O43559 492 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 SNNO75324 88 aaPredicted RBP10.93□□□□□ -0.66
VAMP1-206ENST00000538970 WNT11O96014 354 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 F12P00748 615 aaPredicted RBP10.93□□□□□ -0.66
VAMP1-206ENST00000538970 IFNA2P01563 188 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 IL6P05231 212 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 BCHEP06276 602 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 TFPTP0C1Z6 253 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 GKN3PP0CG01 181 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 BMP4P12644 408 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 ETFAP13804 333 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 APOBEC3AP31941 199 aaPredicted RBP10.93□□□□□ -0.66
VAMP1-206ENST00000538970 EFNA4P52798 201 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 CRISP3P54108 245 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 WDR4P57081 412 aaKnown RBP10.93□□□□□ -0.66
VAMP1-206ENST00000538970 PRPS1P60891 318 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 CHRNB3Q05901 458 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 BNIP2Q12982 314 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 PDCD4Q53EL6 469 aaKnown RBP10.93□□□□□ -0.66
VAMP1-206ENST00000538970 HIKESHIQ53FT3 197 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 RNF220Q5VTB9 566 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 WBP2NLQ6ICG8 309 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 KLHL24Q6TFL4 600 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 GPAT4Q86UL3 456 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 CADM2Q8N3J6 435 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 ANKRD42Q8N9B4 389 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 OR52P1PQ8NH57 321 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM158Q8WZ71 300 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 FAM168AQ92567 244 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 MAELQ96JY0 434 aaKnown RBP10.93□□□□□ -0.66
VAMP1-206ENST00000538970 PARD6BQ9BYG5 372 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 THAP1Q9NVV9 213 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 PRDM4Q9UKN5 801 aa10.93□□□□□ -0.66
VAMP1-206ENST00000538970 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM229AB2RXF0 380 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 KLF11O14901 512 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 NPIPB7O75200 414 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 SLC22A3O75751 556 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 LY6HO94772 140 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 CSF3P09919 207 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 ZCCHC18P0CG32 403 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 PRG2P13727 222 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 IDO1P14902 403 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 CDH2P19022 906 aaPredicted RBP10.92□□□□□ -0.66
VAMP1-206ENST00000538970 CRATP43155 626 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 DSTNP60981 165 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 COPZ1P61923 177 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 SWI5Q1ZZU3 235 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 MST1LQ2TV78 715 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 GTDC1Q4AE62 458 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 RPS26P11Q5JNZ5 115 aaPredicted RBP10.92□□□□□ -0.66
VAMP1-206ENST00000538970 HHATQ5VTY9 493 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 ABHD12BQ7Z5M8 362 aaPredicted RBP10.92□□□□□ -0.66
VAMP1-206ENST00000538970 CLIP4Q8N3C7 705 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 OR1K1Q8NGR3 316 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 SLC38A5Q8WUX1 472 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 C3orf49Q96BT1 292 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 AURKBQ96GD4 344 aaPredicted RBP10.92□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM19Q96HH6 336 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 ALKBH3Q96Q83 286 aaPredicted RBP10.92□□□□□ -0.66
VAMP1-206ENST00000538970 TAPBPLQ9BX59 468 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 TPT1P8Q9HAU6 139 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 OBP2BQ9NPH6 170 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM160Q9NX00 188 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 ADPRHL2Q9NX46 363 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 CALML5Q9NZT1 146 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 CDC42EP3Q9UKI2 254 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 MOKQ9UQ07 419 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 CHST2Q9Y4C5 530 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 PMF1-BGLAPU3KQ54 211 aa10.92□□□□□ -0.66
VAMP1-206ENST00000538970 A0A096LPI6 279 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 IGHV1-18A0A0C4DH31 117 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 TMEM120BA0PK00 339 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 VAMP5O95183 116 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 LGI1O95970 557 aa10.91□□□□□ -0.66
VAMP1-206ENST00000538970 FAM157CP0CG43 387 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms