RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 DCDC2BA2VCK2 349 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 NOTOA8MTQ0 251 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 EEF1E1O43324 174 aaKnown RBP13.34□□□□□ -0.27
CDCA3-207ENST00000538862 HYAL3O43820 417 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-207ENST00000538862 ZNF780AO75290 641 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-207ENST00000538862 UBL3O95164 117 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 NDUFB2O95178 105 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 S1PR1P21453 382 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 ENPP1P22413 925 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 EMDP50402 254 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 GBX2P52951 348 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-207ENST00000538862 PITPNAQ00169 270 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 GALK2Q01415 458 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 SLC25A35Q3KQZ1 300 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 FAM209AQ5JX71 171 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 SNAP47Q5SQN1 464 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 PEAR1Q5VY43 1037 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-207ENST00000538862 ULK3Q6PHR2 472 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 RPTNQ6XPR3 784 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 SHISA5Q8N114 240 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 SPERTQ8NA61 448 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 OR52E2Q8NGJ4 325 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 OR2I1PQ8NGU4 316 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 SMIM19Q96E16 107 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 PEX11GQ96HA9 241 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 HYLS1Q96M11 299 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 ERMAPQ96PL5 475 aaPredicted RBP13.34□□□□□ -0.27
CDCA3-207ENST00000538862 KLHL1Q9NR64 748 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 DLL3Q9NYJ7 618 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 MRPL39Q9NYK5 338 aaKnown RBP13.34□□□□□ -0.27
CDCA3-207ENST00000538862 ICAM5Q9UMF0 924 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 PCDH15Q96QU1 1955 aa13.34□□□□□ -0.27
CDCA3-207ENST00000538862 C7orf66A4D0T2 115 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 ANKRD61A6NGH8 418 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 OR5K4A6NMS3 321 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 OR10H2O60403 315 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CPNE3O75131 537 aaKnown RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 ARL6IP5O75915 188 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 GYPBP06028 91 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 NGFRP08138 427 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 AKT2P31751 481 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 BTCP35070 178 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 MMP15P51511 669 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 VSX2P58304 361 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 UBE2IP63279 158 aaKnown RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CRYZQ08257 329 aaKnown RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 LGALS3BPQ08380 585 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 FGFBP1Q14512 234 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF141Q15928 474 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 NTRK2Q16620 822 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 SLC36A2Q495M3 483 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CDONQ4KMG0 1287 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 WDR45BQ5MNZ6 344 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 BAIAP2L2Q6UXY1 529 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 SSX6Q7RTT6 188 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 GHDCQ8N2G8 530 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 ZNF614Q8N883 585 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CADM4Q8NFZ8 388 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 GPBAR1Q8TDU6 330 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 DEDD2Q8WXF8 326 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 THAP4Q8WY91 577 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CNN2Q99439 309 aaKnown RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 DPAGT1Q9H3H5 408 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 HS3ST3A1Q9Y663 406 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 LRP4O75096 1905 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 A0A0A6YYJ9 748 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 C4orf47A7E2U8 309 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 ADAM11O75078 769 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 GATBO75879 557 aaKnown RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 OR2B3O76000 313 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 TNFP01375 233 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 EVI2BP34910 448 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 GPR143P51810 404 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 DBPQ10586 325 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CDK5R1Q15078 307 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 RPL22L1Q6P5R6 122 aaKnown RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 SLC23A3Q6PIS1 610 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 DGAT2L6Q6ZPD8 337 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CREB3L2Q70SY1 520 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 OVCH1Q7RTY7 1134 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 LSRQ86X29 649 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CMIPQ8IY22 773 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 FAM98AQ8NCA5 519 aaKnown RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 PHYHIPQ92561 330 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 PELI1Q96FA3 418 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 SCMH1Q96GD3 660 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CMTM3Q96MX0 182 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 CCDC3Q9BQI4 270 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 MKKSQ9NPJ1 570 aaPredicted RBP13.33□□□□□ -0.28
CDCA3-207ENST00000538862 COPZ2Q9P299 210 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 RPS6KB2Q9UBS0 482 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 NUBP2Q9Y5Y2 271 aa13.33□□□□□ -0.28
CDCA3-207ENST00000538862 KIR2DS5A0A0G2JLQ3 304 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 A0A0G2JNG1 304 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 SYNDIG1LA6NDD5 238 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 NPIPB9F8W1W9 429 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 KIR2DS3K7RE56 304 aa13.32□□□□□ -0.28
CDCA3-207ENST00000538862 CDX4O14627 284 aaPredicted RBP13.32□□□□□ -0.28
CDCA3-207ENST00000538862 FLRT2O43155 660 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms